RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 NLRP2Q9NX02 1062 aa17.4■□□□□ 0.38
PABPC1-205ENST00000518196 NUDCQ9Y266 331 aa17.4■□□□□ 0.38
PABPC1-205ENST00000518196 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
PABPC1-205ENST00000518196 CRB1P82279 1406 aa17.38■□□□□ 0.37
PABPC1-205ENST00000518196 IL13P35225 146 aa17.38■□□□□ 0.37
PABPC1-205ENST00000518196 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
PABPC1-205ENST00000518196 ATRNO75882 1429 aa17.38■□□□□ 0.37
PABPC1-205ENST00000518196 SPATA31A5Q5VU36 1347 aa17.37■□□□□ 0.37
PABPC1-205ENST00000518196 SPATA31A7Q8IWB4 1347 aa17.37■□□□□ 0.37
PABPC1-205ENST00000518196 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
PABPC1-205ENST00000518196 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
PABPC1-205ENST00000518196 NBPF6Q5VWK0 638 aa17.36■□□□□ 0.37
PABPC1-205ENST00000518196 GJD4Q96KN9 370 aaPredicted RBP17.36■□□□□ 0.37
PABPC1-205ENST00000518196 NBPF4Q96M43 638 aa17.36■□□□□ 0.37
PABPC1-205ENST00000518196 EYA1Q99502 592 aa17.36■□□□□ 0.37
PABPC1-205ENST00000518196 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
PABPC1-205ENST00000518196 SPATA31A1Q5TZJ5 1347 aa17.36■□□□□ 0.37
PABPC1-205ENST00000518196 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
PABPC1-205ENST00000518196 TCP11L2Q8N4U5 519 aa17.35■□□□□ 0.37
PABPC1-205ENST00000518196 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
PABPC1-205ENST00000518196 MRS2Q9HD23 443 aa17.34■□□□□ 0.37
PABPC1-205ENST00000518196 RGS17Q9UGC6 210 aaPredicted RBP17.34■□□□□ 0.37
PABPC1-205ENST00000518196 IGSF1Q8N6C5 1336 aa17.33■□□□□ 0.36
PABPC1-205ENST00000518196 RBM6P78332 1123 aaKnown RBP17.33■□□□□ 0.36
PABPC1-205ENST00000518196 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
PABPC1-205ENST00000518196 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
PABPC1-205ENST00000518196 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
PABPC1-205ENST00000518196 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
PABPC1-205ENST00000518196 RXRBP28702 533 aa17.31■□□□□ 0.36
PABPC1-205ENST00000518196 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
PABPC1-205ENST00000518196 WDR43Q15061 677 aaKnown RBP eCLIP17.31■□□□□ 0.36
PABPC1-205ENST00000518196 SULT6B1Q6IMI4 303 aa17.31■□□□□ 0.36
PABPC1-205ENST00000518196 BARGINQ6ZT62 677 aa17.31■□□□□ 0.36
PABPC1-205ENST00000518196 CDCA7Q9BWT1 371 aaPredicted RBP17.31■□□□□ 0.36
PABPC1-205ENST00000518196 CCDC184Q52MB2 194 aa17.3■□□□□ 0.36
PABPC1-205ENST00000518196 POTEAQ6S8J7 498 aa17.3■□□□□ 0.36
PABPC1-205ENST00000518196 RAPGEF4Q8WZA2 1011 aa17.3■□□□□ 0.36
PABPC1-205ENST00000518196 RGPD1P0DJD0 1748 aa17.3■□□□□ 0.36
PABPC1-205ENST00000518196 IL2RBP14784 551 aa17.29■□□□□ 0.36
PABPC1-205ENST00000518196 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
PABPC1-205ENST00000518196 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
PABPC1-205ENST00000518196 GLI3P10071 1580 aa17.28■□□□□ 0.36
PABPC1-205ENST00000518196 ECM2O94769 699 aaPredicted RBP17.28■□□□□ 0.36
PABPC1-205ENST00000518196 HMOX1P09601 288 aa17.28■□□□□ 0.36
PABPC1-205ENST00000518196 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
PABPC1-205ENST00000518196 NCAPD2Q15021 1401 aa17.28■□□□□ 0.36
PABPC1-205ENST00000518196 A0A0G2JS52 829 aa17.27■□□□□ 0.36
PABPC1-205ENST00000518196 FCHSD2O94868 740 aa17.27■□□□□ 0.36
PABPC1-205ENST00000518196 MYT1Q01538 1121 aa17.27■□□□□ 0.36
PABPC1-205ENST00000518196 WNK3Q9BYP7 1800 aa17.26■□□□□ 0.35
PABPC1-205ENST00000518196 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
PABPC1-205ENST00000518196 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
PABPC1-205ENST00000518196 KDRP35968 1356 aa17.26■□□□□ 0.35
PABPC1-205ENST00000518196 NEFMP07197 916 aa17.25■□□□□ 0.35
PABPC1-205ENST00000518196 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
PABPC1-205ENST00000518196 PARP4Q9UKK3 1724 aaKnown RBP17.24■□□□□ 0.35
PABPC1-205ENST00000518196 EXOC5O00471 708 aa17.24■□□□□ 0.35
PABPC1-205ENST00000518196 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
PABPC1-205ENST00000518196 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
PABPC1-205ENST00000518196 DISP2A7MBM2 1401 aa17.23■□□□□ 0.35
PABPC1-205ENST00000518196 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
PABPC1-205ENST00000518196 DDB1Q16531 1140 aa17.23■□□□□ 0.35
PABPC1-205ENST00000518196 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
PABPC1-205ENST00000518196 SEPT12Q8IYM1 358 aa17.23■□□□□ 0.35
PABPC1-205ENST00000518196 ZCRB1Q8TBF4 217 aaKnown RBP17.23■□□□□ 0.35
PABPC1-205ENST00000518196 ADAMTS8Q9UP79 889 aa17.23■□□□□ 0.35
PABPC1-205ENST00000518196 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
PABPC1-205ENST00000518196 MNX1P50219 401 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-205ENST00000518196 AMOTQ4VCS5 1084 aa17.22■□□□□ 0.35
PABPC1-205ENST00000518196 SPG7Q9UQ90 795 aa17.22■□□□□ 0.35
PABPC1-205ENST00000518196 MEGF6O75095 1541 aa17.21■□□□□ 0.35
PABPC1-205ENST00000518196 THSD7AQ9UPZ6 1657 aa17.21■□□□□ 0.35
PABPC1-205ENST00000518196 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
PABPC1-205ENST00000518196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.21■□□□□ 0.35
PABPC1-205ENST00000518196 OVOS2A0A0G2JMS6 1433 aa17.21■□□□□ 0.34
PABPC1-205ENST00000518196 NUBP1P53384 320 aa17.2■□□□□ 0.34
PABPC1-205ENST00000518196 PDE3BQ13370 1112 aa17.2■□□□□ 0.34
PABPC1-205ENST00000518196 MAPK8IP3Q9UPT6 1336 aa17.19■□□□□ 0.34
PABPC1-205ENST00000518196 RUNDC1Q96C34 613 aa17.18■□□□□ 0.34
PABPC1-205ENST00000518196 PLEKHF1Q96S99 279 aa17.18■□□□□ 0.34
PABPC1-205ENST00000518196 TNS2Q63HR2 1409 aa17.18■□□□□ 0.34
PABPC1-205ENST00000518196 PCDH11XQ9BZA7 1347 aa17.18■□□□□ 0.34
PABPC1-205ENST00000518196 PCDH11YQ9BZA8 1340 aa17.18■□□□□ 0.34
PABPC1-205ENST00000518196 PKD1L3Q7Z443 1732 aa17.17■□□□□ 0.34
PABPC1-205ENST00000518196 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
PABPC1-205ENST00000518196 GAS2L2Q8NHY3 880 aa17.17■□□□□ 0.34
PABPC1-205ENST00000518196 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
PABPC1-205ENST00000518196 LRRC37A3O60309 1634 aa17.17■□□□□ 0.34
PABPC1-205ENST00000518196 RGS12O14924 1447 aa17.16■□□□□ 0.34
PABPC1-205ENST00000518196 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
PABPC1-205ENST00000518196 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
PABPC1-205ENST00000518196 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
PABPC1-205ENST00000518196 BRWD3Q6RI45 1802 aa17.16■□□□□ 0.34
PABPC1-205ENST00000518196 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
PABPC1-205ENST00000518196 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
PABPC1-205ENST00000518196 IFNL2Q8IZJ0 200 aa17.15■□□□□ 0.34
PABPC1-205ENST00000518196 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.33
PABPC1-205ENST00000518196 AKAP4Q5JQC9 854 aa17.13■□□□□ 0.33
PABPC1-205ENST00000518196 MARCH10Q8NA82 808 aaPredicted RBP17.13■□□□□ 0.33
PABPC1-205ENST00000518196 SHANK3Q9BYB0 1731 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms