RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895		Q6ZVU0	165 aa		11.2	□□□□□ -0.62
LINC01088-208	ENST00000511895	USP17L1	Q7RTZ2	530 aa		11.2	□□□□□ -0.62
LINC01088-208	ENST00000511895	AGBL1	Q96MI9	1066 aa		11.2	□□□□□ -0.62
LINC01088-208	ENST00000511895	SERPINA10	Q9UK55	444 aa		11.2	□□□□□ -0.62
LINC01088-208	ENST00000511895	ADH1A	P07327	375 aa		11.19	□□□□□ -0.62
LINC01088-208	ENST00000511895	LMOD1	P29536	600 aa	Predicted RBP	11.19	□□□□□ -0.62
LINC01088-208	ENST00000511895	RELB	Q01201	579 aa		11.19	□□□□□ -0.62
LINC01088-208	ENST00000511895	C6orf118	Q5T5N4	469 aa		11.19	□□□□□ -0.62
LINC01088-208	ENST00000511895	MRPL14	Q6P1L8	145 aa	Known RBP	11.19	□□□□□ -0.62
LINC01088-208	ENST00000511895	C1orf115	Q9H7X2	142 aa		11.19	□□□□□ -0.62
LINC01088-208	ENST00000511895	NOD1	Q9Y239	953 aa		11.19	□□□□□ -0.62
LINC01088-208	ENST00000511895	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.19	□□□□□ -0.62
LINC01088-208	ENST00000511895	LZTS3	O60299	673 aa	Predicted RBP	11.18	□□□□□ -0.62
LINC01088-208	ENST00000511895	RFX1	P22670	979 aa		11.18	□□□□□ -0.62
LINC01088-208	ENST00000511895	SCARF1	Q14162	830 aa		11.18	□□□□□ -0.62
LINC01088-208	ENST00000511895	CYP2U1	Q7Z449	544 aa		11.18	□□□□□ -0.62
LINC01088-208	ENST00000511895	LINC00528	Q8N1L1	170 aa		11.18	□□□□□ -0.62
LINC01088-208	ENST00000511895	CCDC82	Q8N4S0	544 aa		11.18	□□□□□ -0.62
LINC01088-208	ENST00000511895	TSEN34	Q9BSV6	310 aa	Known RBP	11.18	□□□□□ -0.62
LINC01088-208	ENST00000511895	DACH1	Q9UI36	760 aa		11.18	□□□□□ -0.62
LINC01088-208	ENST00000511895	ATP5J2-PTCD1	G3V325	749 aa		11.17	□□□□□ -0.62
LINC01088-208	ENST00000511895	BMP2	P12643	396 aa		11.17	□□□□□ -0.62
LINC01088-208	ENST00000511895	PLEKHM2	Q8IWE5	1019 aa		11.17	□□□□□ -0.62
LINC01088-208	ENST00000511895	PURB	Q96QR8	312 aa	Known RBP	11.17	□□□□□ -0.62
LINC01088-208	ENST00000511895	OSBPL3	Q9H4L5	887 aa		11.17	□□□□□ -0.62
LINC01088-208	ENST00000511895	ATP13A2	Q9NQ11	1180 aa		11.17	□□□□□ -0.62
LINC01088-208	ENST00000511895	TRIM46	Q7Z4K8	759 aa		11.16	□□□□□ -0.62
LINC01088-208	ENST00000511895	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.16	□□□□□ -0.62
LINC01088-208	ENST00000511895	LCE2B	O14633	110 aa		11.15	□□□□□ -0.62
LINC01088-208	ENST00000511895	PSME1	Q06323	249 aa		11.15	□□□□□ -0.62
LINC01088-208	ENST00000511895	PTGIR	P43119	386 aa		11.14	□□□□□ -0.63
LINC01088-208	ENST00000511895	CFAP70	Q5T0N1	1121 aa		11.14	□□□□□ -0.63
LINC01088-208	ENST00000511895	ARID3A	Q99856	593 aa		11.14	□□□□□ -0.63
LINC01088-208	ENST00000511895	MKRN1	Q9UHC7	482 aa	Known RBP	11.14	□□□□□ -0.63
LINC01088-208	ENST00000511895	GTF2I	P78347	998 aa		11.13	□□□□□ -0.63
LINC01088-208	ENST00000511895	TRIM50	Q86XT4	487 aa		11.13	□□□□□ -0.63
LINC01088-208	ENST00000511895	MEN1	O00255	615 aa		11.12	□□□□□ -0.63
LINC01088-208	ENST00000511895	ZFP42	Q96MM3	310 aa		11.12	□□□□□ -0.63
LINC01088-208	ENST00000511895	ARHGEF10L	Q9HCE6	1279 aa		11.12	□□□□□ -0.63
LINC01088-208	ENST00000511895	ATP1A2	P50993	1020 aa		11.11	□□□□□ -0.63
LINC01088-208	ENST00000511895	VRTN	Q9H8Y1	702 aa		11.11	□□□□□ -0.63
LINC01088-208	ENST00000511895	POLM	Q9NP87	494 aa	Predicted RBP	11.11	□□□□□ -0.63
LINC01088-208	ENST00000511895	RAB6B	Q9NRW1	208 aa		11.11	□□□□□ -0.63
LINC01088-208	ENST00000511895		A0A1W2PRU2	124 aa		11.1	□□□□□ -0.63
LINC01088-208	ENST00000511895	GNRH1	P01148	92 aa		11.1	□□□□□ -0.63
LINC01088-208	ENST00000511895	CDCA8	Q53HL2	280 aa		11.1	□□□□□ -0.63
LINC01088-208	ENST00000511895	KDF1	Q8NAX2	398 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC01088-208	ENST00000511895	INSM2	Q96T92	566 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC01088-208	ENST00000511895	SENP2	Q9HC62	589 aa		11.1	□□□□□ -0.63
LINC01088-208	ENST00000511895	GMPR2	Q9P2T1	348 aa	Known RBP	11.1	□□□□□ -0.63
LINC01088-208	ENST00000511895	SPINT1	O43278	529 aa		11.09	□□□□□ -0.63
LINC01088-208	ENST00000511895	RASA1	P20936	1047 aa		11.09	□□□□□ -0.63
LINC01088-208	ENST00000511895	OGFOD1	Q8N543	542 aa		11.09	□□□□□ -0.63
LINC01088-208	ENST00000511895	NLRP3	Q96P20	1036 aa		11.09	□□□□□ -0.63
LINC01088-208	ENST00000511895	DNAAF2	Q9NVR5	837 aa	Known RBP	11.09	□□□□□ -0.63
LINC01088-208	ENST00000511895	PCDHGA11	Q9Y5H2	935 aa		11.09	□□□□□ -0.63
LINC01088-208	ENST00000511895	STAU1	O95793	577 aa	Known RBP	11.08	□□□□□ -0.64
LINC01088-208	ENST00000511895	ESCO1	Q5FWF5	840 aa		11.08	□□□□□ -0.64
LINC01088-208	ENST00000511895	LARP1	Q6PKG0	1096 aa	Known RBP	11.08	□□□□□ -0.64
LINC01088-208	ENST00000511895	KIFC2	Q96AC6	838 aa		11.07	□□□□□ -0.64
LINC01088-208	ENST00000511895	ZNF594	Q96JF6	807 aa	Predicted RBP	11.07	□□□□□ -0.64
LINC01088-208	ENST00000511895	RBM19	Q9Y4C8	960 aa	Known RBP	11.07	□□□□□ -0.64
LINC01088-208	ENST00000511895	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.06	□□□□□ -0.64
LINC01088-208	ENST00000511895	C11orf95	C9JLR9	678 aa	Predicted RBP	11.06	□□□□□ -0.64
LINC01088-208	ENST00000511895	CTSO	P43234	321 aa	Predicted RBP	11.06	□□□□□ -0.64
LINC01088-208	ENST00000511895	GDF10	P55107	478 aa		11.06	□□□□□ -0.64
LINC01088-208	ENST00000511895	CLDN10	P78369	228 aa		11.06	□□□□□ -0.64
LINC01088-208	ENST00000511895	KANK4	Q5T7N3	995 aa	Predicted RBP	11.06	□□□□□ -0.64
LINC01088-208	ENST00000511895	ETNK1	Q9HBU6	452 aa		11.06	□□□□□ -0.64
LINC01088-208	ENST00000511895	TTLL8	A6PVC2	850 aa		11.05	□□□□□ -0.64
LINC01088-208	ENST00000511895	CLN3	Q13286	438 aa		11.05	□□□□□ -0.64
LINC01088-208	ENST00000511895	TPCN2	Q8NHX9	752 aa		11.05	□□□□□ -0.64
LINC01088-208	ENST00000511895	CNKSR1	Q969H4	720 aa		11.05	□□□□□ -0.64
LINC01088-208	ENST00000511895	FIGNL2	A6NMB9	653 aa		11.04	□□□□□ -0.64
LINC01088-208	ENST00000511895	MAN1A2	O60476	641 aa		11.04	□□□□□ -0.64
LINC01088-208	ENST00000511895	CCDC102B	Q68D86	513 aa		11.04	□□□□□ -0.64
LINC01088-208	ENST00000511895	TRIM47	Q96LD4	638 aa		11.04	□□□□□ -0.64
LINC01088-208	ENST00000511895	SERTAD1	Q9UHV2	236 aa		11.04	□□□□□ -0.64
LINC01088-208	ENST00000511895	KIAA1024	Q9UPX6	916 aa		11.04	□□□□□ -0.64
LINC01088-208	ENST00000511895	POTEC	B2RU33	542 aa		11.03	□□□□□ -0.64
LINC01088-208	ENST00000511895	IL2RA	P01589	272 aa		11.03	□□□□□ -0.64
LINC01088-208	ENST00000511895	SCNN1D	P51172	638 aa		11.03	□□□□□ -0.64
LINC01088-208	ENST00000511895	SLC27A3	Q5K4L6	730 aa		11.03	□□□□□ -0.64
LINC01088-208	ENST00000511895	LARGE2	Q8N3Y3	721 aa		11.03	□□□□□ -0.64
LINC01088-208	ENST00000511895	ESYT1	Q9BSJ8	1104 aa		11.03	□□□□□ -0.64
LINC01088-208	ENST00000511895	SOS2	Q07890	1332 aa	Predicted RBP	11.03	□□□□□ -0.64
LINC01088-208	ENST00000511895	USP17L15	C9J2P7	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L10	C9JJH3	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L13	C9JLJ4	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L12	C9JPN9	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L11	C9JVI0	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L21	D6R901	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L18	D6R9N7	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L22	D6RA61	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L17	D6RBQ6	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L19	D6RCP7	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L20	D6RJB6	530 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	ZBTB7B	O15156	539 aa	Predicted RBP	11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	INHA	P05111	366 aa		11.02	□□□□□ -0.65
LINC01088-208	ENST00000511895	USP17L24	Q0WX57	530 aa		11.02	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms