RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ESPNB1AK53 854 aa6□□□□□ -1.45
HMGB1P35-201ENST00000503360 WDR44Q5JSH3 913 aa6□□□□□ -1.45
HMGB1P35-201ENST00000503360 ZNF784Q8NCA9 323 aaPredicted RBP6□□□□□ -1.45
HMGB1P35-201ENST00000503360 PNMA1Q8ND90 353 aa6□□□□□ -1.45
HMGB1P35-201ENST00000503360 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
HMGB1P35-201ENST00000503360 IGF1RP08069 1367 aa6□□□□□ -1.45
HMGB1P35-201ENST00000503360 CNTNAP5Q8WYK1 1306 aa5.99□□□□□ -1.45
HMGB1P35-201ENST00000503360 K7ELQ4 463 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P35-201ENST00000503360 CTDSPL2Q05D32 466 aa5.99□□□□□ -1.45
HMGB1P35-201ENST00000503360 GALNT6Q8NCL4 622 aa5.99□□□□□ -1.45
HMGB1P35-201ENST00000503360 OCSTAMPQ9BR26 566 aa5.99□□□□□ -1.45
HMGB1P35-201ENST00000503360 DYRK1BQ9Y463 629 aa5.99□□□□□ -1.45
HMGB1P35-201ENST00000503360 NEDD1Q8NHV4 660 aa5.98□□□□□ -1.45
HMGB1P35-201ENST00000503360 ADAM32Q8TC27 787 aa5.98□□□□□ -1.45
HMGB1P35-201ENST00000503360 ZNF395Q9H8N7 513 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P35-201ENST00000503360 OIP5O43482 229 aa5.97□□□□□ -1.45
HMGB1P35-201ENST00000503360 ADD1P35611 737 aaKnown RBP5.97□□□□□ -1.45
HMGB1P35-201ENST00000503360 TRERF1Q96PN7 1200 aa5.97□□□□□ -1.45
HMGB1P35-201ENST00000503360 ERVH48-1M5A8F1 160 aa5.96□□□□□ -1.46
HMGB1P35-201ENST00000503360 PDE4DQ08499 809 aa5.96□□□□□ -1.46
HMGB1P35-201ENST00000503360 DBN1Q16643 649 aa5.96□□□□□ -1.46
HMGB1P35-201ENST00000503360 ACDQ96AP0 544 aa5.96□□□□□ -1.46
HMGB1P35-201ENST00000503360 TMPRSS4Q9NRS4 437 aa5.96□□□□□ -1.46
HMGB1P35-201ENST00000503360 MAP2K3P46734 347 aa5.95□□□□□ -1.46
HMGB1P35-201ENST00000503360 SPATA31C2B4DYI2 1134 aa5.94□□□□□ -1.46
HMGB1P35-201ENST00000503360 BAG6P46379 1132 aa5.94□□□□□ -1.46
HMGB1P35-201ENST00000503360 DZIP3Q86Y13 1208 aaKnown RBP5.94□□□□□ -1.46
HMGB1P35-201ENST00000503360 LRRN4Q8WUT4 740 aa5.94□□□□□ -1.46
HMGB1P35-201ENST00000503360 CFHR5Q9BXR6 569 aa5.94□□□□□ -1.46
HMGB1P35-201ENST00000503360 MKL2Q9ULH7 1088 aa5.94□□□□□ -1.46
HMGB1P35-201ENST00000503360 PIK3R2O00459 728 aa5.93□□□□□ -1.46
HMGB1P35-201ENST00000503360 MX2P20592 715 aa5.93□□□□□ -1.46
HMGB1P35-201ENST00000503360 NR6A1Q15406 480 aa5.93□□□□□ -1.46
HMGB1P35-201ENST00000503360 PRICKLE2Q7Z3G6 844 aa5.93□□□□□ -1.46
HMGB1P35-201ENST00000503360 Q8N3U1 123 aa5.93□□□□□ -1.46
HMGB1P35-201ENST00000503360 ATP5J2-PTCD1G3V325 749 aa5.92□□□□□ -1.46
HMGB1P35-201ENST00000503360 SKIV2LQ15477 1246 aaKnown RBP5.92□□□□□ -1.46
HMGB1P35-201ENST00000503360 OXCT2Q9BYC2 517 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P35-201ENST00000503360 GRIP2Q9C0E4 1043 aa5.92□□□□□ -1.46
HMGB1P35-201ENST00000503360 GDF2Q9UK05 429 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P35-201ENST00000503360 KRBA1A5PL33 1030 aa5.91□□□□□ -1.46
HMGB1P35-201ENST00000503360 GTPBP3Q969Y2 492 aaKnown RBP5.91□□□□□ -1.46
HMGB1P35-201ENST00000503360 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.91□□□□□ -1.46
HMGB1P35-201ENST00000503360 GPR25O00155 361 aa5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 RHOQP17081 205 aa5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 MCCD1P59942 119 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 CLN3Q13286 438 aa5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 LBRQ14739 615 aaKnown RBP5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 NBPF10Q6P3W6 841 aaKnown RBP5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 RIPOR1Q6ZS17 1223 aa5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 NBPF15Q8N660 670 aa5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 PSMG3-AS1Q96PY0 264 aa5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 POLR3EQ9NVU0 708 aa5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 PHF24Q9UPV7 400 aa5.9□□□□□ -1.46
HMGB1P35-201ENST00000503360 F11P03951 625 aa5.89□□□□□ -1.47
HMGB1P35-201ENST00000503360 ERVK-9P63128 1117 aa5.89□□□□□ -1.47
HMGB1P35-201ENST00000503360 SH3D19Q5HYK7 790 aa5.89□□□□□ -1.47
HMGB1P35-201ENST00000503360 ZNF592Q92610 1267 aa5.89□□□□□ -1.47
HMGB1P35-201ENST00000503360 A0A1W2PRU2 124 aa5.88□□□□□ -1.47
HMGB1P35-201ENST00000503360 SNRPNP63162 240 aaKnown RBP5.88□□□□□ -1.47
HMGB1P35-201ENST00000503360 RNF20Q5VTR2 975 aa5.88□□□□□ -1.47
HMGB1P35-201ENST00000503360 GOLGA6L1Q8N7Z2 621 aa5.88□□□□□ -1.47
HMGB1P35-201ENST00000503360 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
HMGB1P35-201ENST00000503360 NUCKS1Q9H1E3 243 aaKnown RBP5.88□□□□□ -1.47
HMGB1P35-201ENST00000503360 COL8A1P27658 744 aa5.87□□□□□ -1.47
HMGB1P35-201ENST00000503360 SLC27A3Q5K4L6 730 aa5.87□□□□□ -1.47
HMGB1P35-201ENST00000503360 CC2D2BQ6DHV5 1058 aa5.87□□□□□ -1.47
HMGB1P35-201ENST00000503360 TAS1R3Q7RTX0 852 aa5.87□□□□□ -1.47
HMGB1P35-201ENST00000503360 CYP2U1Q7Z449 544 aa5.87□□□□□ -1.47
HMGB1P35-201ENST00000503360 NLRP3Q96P20 1036 aa5.87□□□□□ -1.47
HMGB1P35-201ENST00000503360 GAS2L1Q99501 681 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P35-201ENST00000503360 CYLDQ9NQC7 956 aa5.87□□□□□ -1.47
HMGB1P35-201ENST00000503360 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P35-201ENST00000503360 MEN1O00255 615 aa5.86□□□□□ -1.47
HMGB1P35-201ENST00000503360 POU4F2Q12837 409 aa5.86□□□□□ -1.47
HMGB1P35-201ENST00000503360 SLCO4C1Q6ZQN7 724 aa5.86□□□□□ -1.47
HMGB1P35-201ENST00000503360 KLRG1Q96E93 195 aa5.86□□□□□ -1.47
HMGB1P35-201ENST00000503360 TIMMDC1Q9NPL8 285 aa5.86□□□□□ -1.47
HMGB1P35-201ENST00000503360 SHISA8B8ZZ34 492 aa5.85□□□□□ -1.47
HMGB1P35-201ENST00000503360 WASLO00401 505 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P35-201ENST00000503360 HOXB4P17483 251 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P35-201ENST00000503360 RAB15P59190 212 aa5.85□□□□□ -1.47
HMGB1P35-201ENST00000503360 LINC00114Q6XXX2 140 aa5.85□□□□□ -1.47
HMGB1P35-201ENST00000503360 EDARADDQ8WWZ3 215 aa5.85□□□□□ -1.47
HMGB1P35-201ENST00000503360 A0A1B0GTH6 734 aa5.84□□□□□ -1.47
HMGB1P35-201ENST00000503360 GNB5O14775 395 aa5.84□□□□□ -1.47
HMGB1P35-201ENST00000503360 TRAK2O60296 914 aa5.84□□□□□ -1.47
HMGB1P35-201ENST00000503360 FURINP09958 794 aa5.84□□□□□ -1.47
HMGB1P35-201ENST00000503360 NOP53Q9NZM5 478 aaKnown RBP5.84□□□□□ -1.47
HMGB1P35-201ENST00000503360 ATXN7L1Q9ULK2 861 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P35-201ENST00000503360 ZBBXA8MT70 800 aa5.83□□□□□ -1.48
HMGB1P35-201ENST00000503360 AP1G2O75843 785 aa5.83□□□□□ -1.48
HMGB1P35-201ENST00000503360 GNRH1P01148 92 aa5.83□□□□□ -1.48
HMGB1P35-201ENST00000503360 USP17L8P0C7I0 530 aa5.83□□□□□ -1.48
HMGB1P35-201ENST00000503360 UBAP2LQ14157 1087 aaKnown RBP5.83□□□□□ -1.48
HMGB1P35-201ENST00000503360 EPS8L1Q8TE68 723 aa5.83□□□□□ -1.48
HMGB1P35-201ENST00000503360 DDRGK1Q96HY6 314 aa5.83□□□□□ -1.48
HMGB1P35-201ENST00000503360 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
HMGB1P35-201ENST00000503360 GIGYF1O75420 1035 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P35-201ENST00000503360 THBS1P07996 1170 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms