RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 CHMP4BQ9H444 224 aaKnown RBP4.47□□□□□ -1.69
FXN-204ENST00000484259 ARHGEF10LQ9HCE6 1279 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 NLRP2Q9NX02 1062 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 PRKAG2Q9UGJ0 569 aa4.47□□□□□ -1.69
FXN-204ENST00000484259 FAM187AA6NFU0 413 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 PRC1O43663 620 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 S100BP04271 92 aaPredicted RBP4.46□□□□□ -1.7
FXN-204ENST00000484259 ABL2P42684 1182 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 TBX4P57082 545 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 CAMK2BQ13554 666 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 CCDC96Q2M329 555 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 TSNAXIP1Q2TAA8 658 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 PLEKHG6Q3KR16 790 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 ZKSCAN2Q63HK3 967 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 ICE2Q659A1 982 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.46□□□□□ -1.7
FXN-204ENST00000484259 HELBQ8NG08 1087 aaPredicted RBP4.46□□□□□ -1.7
FXN-204ENST00000484259 SNRNP27Q8WVK2 155 aaKnown RBP4.46□□□□□ -1.7
FXN-204ENST00000484259 MKL1Q969V6 931 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 TRIM44Q96DX7 344 aaPredicted RBP4.46□□□□□ -1.7
FXN-204ENST00000484259 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.46□□□□□ -1.7
FXN-204ENST00000484259 QTRT2Q9H974 415 aaKnown RBP4.46□□□□□ -1.7
FXN-204ENST00000484259 COL4A3BPQ9Y5P4 624 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 SCINQ9Y6U3 715 aa4.46□□□□□ -1.7
FXN-204ENST00000484259 CCDC189A1A4V9 331 aa4.45□□□□□ -1.7
FXN-204ENST00000484259 SOCS7O14512 581 aa4.45□□□□□ -1.7
FXN-204ENST00000484259 SCAMP3O14828 347 aaKnown RBP4.45□□□□□ -1.7
FXN-204ENST00000484259 GTF2F1P35269 517 aaKnown RBP eCLIP4.45□□□□□ -1.7
FXN-204ENST00000484259 RFC5P40937 340 aa4.45□□□□□ -1.7
FXN-204ENST00000484259 NFX1Q12986 1120 aaKnown RBP4.45□□□□□ -1.7
FXN-204ENST00000484259 TCEAL1Q15170 157 aa4.45□□□□□ -1.7
FXN-204ENST00000484259 MSL3Q8N5Y2 521 aaKnown RBP4.45□□□□□ -1.7
FXN-204ENST00000484259 DHX38Q92620 1227 aaKnown RBP4.45□□□□□ -1.7
FXN-204ENST00000484259 PAGR1Q9BTK6 254 aa4.45□□□□□ -1.7
FXN-204ENST00000484259 PCDH12Q9NPG4 1184 aa4.45□□□□□ -1.7
FXN-204ENST00000484259 TCEAL9Q9UHQ7 104 aa4.45□□□□□ -1.7
FXN-204ENST00000484259 RPGRIP1LQ68CZ1 1315 aa4.45□□□□□ -1.7
FXN-204ENST00000484259 CFAP69A5D8W1 941 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 SOWAHDA6NJG2 315 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 GNPATO15228 680 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 ST8SIA5O15466 376 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 EVI5O60447 810 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 VDRP11473 427 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 POLD1P28340 1107 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 LMOD1P29536 600 aaPredicted RBP4.44□□□□□ -1.7
FXN-204ENST00000484259 MMP14P50281 582 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 PRR20EP86478 221 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 PRR20CP86479 221 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 PRR20DP86480 221 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 PRR20BP86481 221 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 PRR20AP86496 221 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 RBL2Q08999 1139 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 ZRSR2Q15696 482 aaKnown RBP4.44□□□□□ -1.7
FXN-204ENST00000484259 FMNL3Q8IVF7 1028 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 NLGN1Q8N2Q7 840 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 DDX27Q96GQ7 796 aaKnown RBP4.44□□□□□ -1.7
FXN-204ENST00000484259 EPAS1Q99814 870 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 TMX1Q9H3N1 280 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 ZSWIM4Q9H7M6 989 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 AAASQ9NRG9 546 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 POLR3EQ9NVU0 708 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 CEP126Q9P2H0 1117 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 NRBP1Q9UHY1 535 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 TPX2Q9ULW0 747 aaKnown RBP4.44□□□□□ -1.7
FXN-204ENST00000484259 G3BP2Q9UN86 482 aaKnown RBP4.44□□□□□ -1.7
FXN-204ENST00000484259 SALL2Q9Y467 1007 aaPredicted RBP4.44□□□□□ -1.7
FXN-204ENST00000484259 NCKAP5LQ9HCH0 1330 aa4.44□□□□□ -1.7
FXN-204ENST00000484259 BICDL2A1A5D9 508 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 PALM3A6NDB9 673 aaPredicted RBP4.43□□□□□ -1.7
FXN-204ENST00000484259 SPDYE16A6NNV3 312 aaPredicted RBP4.43□□□□□ -1.7
FXN-204ENST00000484259 SAFB2Q14151 953 aaKnown RBP eCLIP4.43□□□□□ -1.7
FXN-204ENST00000484259 WASHC4Q2M389 1173 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 ZNF746Q6NUN9 644 aaPredicted RBP4.43□□□□□ -1.7
FXN-204ENST00000484259 CCDC174Q6PII3 467 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 ARMCX6Q7L4S7 300 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 GET4Q7L5D6 327 aaPredicted RBP4.43□□□□□ -1.7
FXN-204ENST00000484259 FILIP1Q7Z7B0 1213 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 CREBRFQ8IUR6 639 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 PDILTQ8N807 584 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 ZNF516Q92618 1163 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 CEP63Q96MT8 703 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 TMUB1Q9BVT8 246 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 BACH2Q9BYV9 841 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 IFT57Q9NWB7 429 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 DDX56Q9NY93 547 aaKnown RBP4.43□□□□□ -1.7
FXN-204ENST00000484259 ANAPC4Q9UJX5 808 aa4.43□□□□□ -1.7
FXN-204ENST00000484259 GOLGA6CA6NDK9 693 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 GOLGA6BA6NDN3 693 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 DHX16O60231 1041 aaKnown RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 GOLGA6DP0CG33 693 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 CD53P19397 219 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 SLC19A1P41440 591 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 HDLBPQ00341 1268 aaKnown RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 POU5F1BQ06416 359 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 LMOD3Q0VAK6 560 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 GNL2Q13823 731 aaKnown RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 HIC1Q14526 733 aa4.42□□□□□ -1.7
FXN-204ENST00000484259 TBC1D10BQ4KMP7 808 aaPredicted RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 CCSAPQ6IQ19 270 aaPredicted RBP4.42□□□□□ -1.7
FXN-204ENST00000484259 OTUD6BQ8N6M0 293 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms