RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 NPATQ14207 1427 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 BAG3O95817 575 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 PLCG2P16885 1265 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 PDCP20941 246 aa5.55□□□□□ -1.52
CCNL1-215ENST00000474539 TPD52L1Q16890 204 aaPredicted RBP5.55□□□□□ -1.52
CCNL1-215ENST00000474539 RBM27Q9P2N5 1060 aaKnown RBP5.55□□□□□ -1.52
CCNL1-215ENST00000474539 MAST3O60307 1309 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 RALGAPBQ86X10 1494 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 HLA-DOAP06340 250 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 TWISTNBQ3B726 338 aaPredicted RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 JDP2Q8WYK2 163 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 DBF4Q9UBU7 674 aaPredicted RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 KDM5DQ9BY66 1539 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 IL16Q14005 1332 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 ADGRL2O95490 1459 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 ANKRD18BA2A2Z9 1011 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 MPHOSPH10O00566 681 aaKnown RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 SNRPA1P09661 255 aaKnown RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 ZC3H6P61129 1189 aaKnown RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 PPP4R3AQ6IN85 833 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 NEUROD6Q96NK8 337 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 RNF41Q9H4P4 317 aaPredicted RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 NPHP4O75161 1426 aaPredicted RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 UQCRFS1P1P0C7P4 283 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 ALDH1L2Q3SY69 923 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 CCDC152Q4G0S7 254 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 PARP10Q53GL7 1025 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 ANKRD2Q9GZV1 360 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 RTCBQ9Y3I0 505 aaKnown RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 ARHGEF12Q9NZN5 1544 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 PLEKHH1Q9ULM0 1364 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 IPO7O95373 1038 aaKnown RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 RBM5P52756 815 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 PDE3AQ14432 1141 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 NUTM2GQ5VZR2 741 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 RPAP2Q8IXW5 612 aaPredicted RBP5.54□□□□□ -1.52
CCNL1-215ENST00000474539 TRIM22Q8IYM9 498 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 JMYQ8N9B5 988 aa5.54□□□□□ -1.52
CCNL1-215ENST00000474539 FLT4P35916 1363 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 TMEM2Q9UHN6 1383 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 PLEKHG1Q9ULL1 1385 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 TARBP1Q13395 1621 aaKnown RBP5.53□□□□□ -1.52
CCNL1-215ENST00000474539 FOXO3O43524 673 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 TMC4Q7Z404 712 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 CABP5Q9NP86 173 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 MAST1Q9Y2H9 1570 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 APAF1O14727 1248 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 PPP2R1AP30153 589 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 OGFOD1Q8N543 542 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 ANKRD24Q8TF21 1146 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 SUPT16HQ9Y5B9 1047 aaKnown RBP5.53□□□□□ -1.52
CCNL1-215ENST00000474539 PTPRCP08575 1304 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 AIMP1Q12904 312 aaKnown RBP5.53□□□□□ -1.52
CCNL1-215ENST00000474539 SKOR2Q2VWA4 1001 aaPredicted RBP5.53□□□□□ -1.52
CCNL1-215ENST00000474539 AKAP4Q5JQC9 854 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 CCDC70Q6NSX1 233 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 TPTE2Q6XPS3 522 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 TNPO1Q92973 898 aaKnown RBP5.53□□□□□ -1.52
CCNL1-215ENST00000474539 C8orf37Q96NL8 207 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 SH2D4AQ9H788 454 aa5.53□□□□□ -1.52
CCNL1-215ENST00000474539 NOL7Q9UMY1 257 aaKnown RBP5.53□□□□□ -1.52
CCNL1-215ENST00000474539 CEBPAP49715 358 aaPredicted RBP5.52□□□□□ -1.53
CCNL1-215ENST00000474539 RILPL2Q969X0 211 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 SETDB2Q96T68 719 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 THRAP3Q9Y2W1 955 aaKnown RBP5.52□□□□□ -1.53
CCNL1-215ENST00000474539 MYO5CQ9NQX4 1742 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 CCDC196A0A1B0GTZ2 297 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 APBB1O00213 710 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 CCDC12Q8WUD4 166 aaPredicted RBP5.52□□□□□ -1.53
CCNL1-215ENST00000474539 DCAF5Q96JK2 942 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 RTL1A6NKG5 1358 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 RAD21O60216 631 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 HMOX1P09601 288 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 SSFA2P28290 1259 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 MAP3K12Q12852 859 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 IFIT5Q13325 482 aaKnown RBP5.52□□□□□ -1.53
CCNL1-215ENST00000474539 MVPQ14764 893 aaKnown RBP5.52□□□□□ -1.53
CCNL1-215ENST00000474539 RBM17Q96I25 401 aaKnown RBP5.52□□□□□ -1.53
CCNL1-215ENST00000474539 NLRP3Q96P20 1036 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.52□□□□□ -1.53
CCNL1-215ENST00000474539 KDM5CP41229 1560 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 KIF4AO95239 1232 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 ANKRD45Q5TZF3 282 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 CRACR2BQ8N4Y2 399 aaPredicted RBP5.52□□□□□ -1.53
CCNL1-215ENST00000474539 CUL5Q93034 780 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 FSD1Q9BTV5 496 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 BCL2L13Q9BXK5 485 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 DISP1Q96F81 1524 aa5.52□□□□□ -1.53
CCNL1-215ENST00000474539 CFAP43Q8NDM7 1665 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 KIF24Q5T7B8 1368 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 ACEP12821 1306 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 TTLL12Q14166 644 aaPredicted RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 FBXO31Q5XUX0 539 aaPredicted RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 PHAXQ9H814 394 aaKnown RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 RXRBP28702 533 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 NCBP3Q53F19 620 aaKnown RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 FAM196AQ6ZSG2 479 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 ZNF804AQ7Z570 1209 aa5.51□□□□□ -1.53
CCNL1-215ENST00000474539 APBB1IPQ7Z5R6 666 aaPredicted RBP5.51□□□□□ -1.53
CCNL1-215ENST00000474539 TCP11L2Q8N4U5 519 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms