RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 CDK12Q9NYV4 1490 aaPredicted RBP10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 VPS72Q15906 364 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 CCDC184Q52MB2 194 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 DCAF8Q5TAQ9 597 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 NBPF6Q5VWK0 638 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 TOM1L2Q6ZVM7 507 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 NBPF4Q96M43 638 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 EYA1Q99502 592 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 NLRP2Q9NX02 1062 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 PEAK1Q9H792 1746 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 LMO7Q8WWI1 1683 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 LTN1O94822 1766 aa10.11□□□□□ -0.79
AC004540.1-206ENST00000448056 COL5A2P05997 1499 aaPredicted RBP10.11□□□□□ -0.79
AC004540.1-206ENST00000448056 CARD10Q9BWT7 1032 aa10.11□□□□□ -0.79
AC004540.1-206ENST00000448056 TRPC5Q9UL62 973 aaPredicted RBP10.11□□□□□ -0.79
AC004540.1-206ENST00000448056 NUDCQ9Y266 331 aa10.11□□□□□ -0.79
AC004540.1-206ENST00000448056 SPATA31A1Q5TZJ5 1347 aa10.1□□□□□ -0.79
AC004540.1-206ENST00000448056 SPATA31A5Q5VU36 1347 aa10.1□□□□□ -0.79
AC004540.1-206ENST00000448056 SPATA31A7Q8IWB4 1347 aa10.1□□□□□ -0.79
AC004540.1-206ENST00000448056 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
AC004540.1-206ENST00000448056 USP35Q9P2H5 1018 aa10.1□□□□□ -0.79
AC004540.1-206ENST00000448056 CCDC9Q9Y3X0 531 aaKnown RBP10.1□□□□□ -0.79
AC004540.1-206ENST00000448056 CRB1P82279 1406 aa10.09□□□□□ -0.79
AC004540.1-206ENST00000448056 CCER2I3L3R5 266 aa10.09□□□□□ -0.79
AC004540.1-206ENST00000448056 U2SURPO15042 1029 aaKnown RBP10.09□□□□□ -0.79
AC004540.1-206ENST00000448056 TCP11L2Q8N4U5 519 aa10.09□□□□□ -0.79
AC004540.1-206ENST00000448056 FAM212AQ96EL1 285 aa10.09□□□□□ -0.79
AC004540.1-206ENST00000448056 MRS2Q9HD23 443 aa10.09□□□□□ -0.79
AC004540.1-206ENST00000448056 THRAP3Q9Y2W1 955 aaKnown RBP10.09□□□□□ -0.79
AC004540.1-206ENST00000448056 COL3A1P02461 1466 aaPredicted RBP10.09□□□□□ -0.79
AC004540.1-206ENST00000448056 ATRNO75882 1429 aa10.08□□□□□ -0.8
AC004540.1-206ENST00000448056 NWD2Q9ULI1 1742 aa10.08□□□□□ -0.8
AC004540.1-206ENST00000448056 U2AF1L5P0DN76 240 aaPredicted RBP10.08□□□□□ -0.8
AC004540.1-206ENST00000448056 U2AF1Q01081 240 aaKnown RBP eCLIP10.08□□□□□ -0.8
AC004540.1-206ENST00000448056 SULT6B1Q6IMI4 303 aa10.08□□□□□ -0.8
AC004540.1-206ENST00000448056 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
AC004540.1-206ENST00000448056 USHBP1Q8N6Y0 703 aa10.08□□□□□ -0.8
AC004540.1-206ENST00000448056 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
AC004540.1-206ENST00000448056 RGPD5Q99666 1765 aa10.08□□□□□ -0.8
AC004540.1-206ENST00000448056 IGSF1Q8N6C5 1336 aa10.07□□□□□ -0.8
AC004540.1-206ENST00000448056 PLCH1Q4KWH8 1693 aa10.07□□□□□ -0.8
AC004540.1-206ENST00000448056 ONECUT3O60422 494 aaPredicted RBP10.07□□□□□ -0.8
AC004540.1-206ENST00000448056 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
AC004540.1-206ENST00000448056 RXRBP28702 533 aa10.07□□□□□ -0.8
AC004540.1-206ENST00000448056 RBM6P78332 1123 aaKnown RBP10.07□□□□□ -0.8
AC004540.1-206ENST00000448056 BARGINQ6ZT62 677 aa10.07□□□□□ -0.8
AC004540.1-206ENST00000448056 FCHSD2O94868 740 aa10.06□□□□□ -0.8
AC004540.1-206ENST00000448056 HMOX1P09601 288 aa10.06□□□□□ -0.8
AC004540.1-206ENST00000448056 FAM98CQ17RN3 349 aaKnown RBP10.06□□□□□ -0.8
AC004540.1-206ENST00000448056 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
AC004540.1-206ENST00000448056 ADAMTS8Q9UP79 889 aa10.06□□□□□ -0.8
AC004540.1-206ENST00000448056 NRAPQ86VF7 1730 aa10.05□□□□□ -0.8
AC004540.1-206ENST00000448056 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
AC004540.1-206ENST00000448056 IL2RBP14784 551 aa10.05□□□□□ -0.8
AC004540.1-206ENST00000448056 WDR43Q15061 677 aaKnown RBP eCLIP10.05□□□□□ -0.8
AC004540.1-206ENST00000448056 RAPGEF4Q8WZA2 1011 aa10.05□□□□□ -0.8
AC004540.1-206ENST00000448056 CDCA7Q9BWT1 371 aaPredicted RBP10.05□□□□□ -0.8
AC004540.1-206ENST00000448056 KDRP35968 1356 aa10.04□□□□□ -0.8
AC004540.1-206ENST00000448056 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
AC004540.1-206ENST00000448056 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
AC004540.1-206ENST00000448056 NCAPD2Q15021 1401 aa10.04□□□□□ -0.8
AC004540.1-206ENST00000448056 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.04□□□□□ -0.8
AC004540.1-206ENST00000448056 EXOC5O00471 708 aa10.03□□□□□ -0.8
AC004540.1-206ENST00000448056 SEPT12Q8IYM1 358 aa10.03□□□□□ -0.8
AC004540.1-206ENST00000448056 PLEKHF1Q96S99 279 aa10.03□□□□□ -0.8
AC004540.1-206ENST00000448056 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
AC004540.1-206ENST00000448056 PNNQ9H307 717 aaKnown RBP10.03□□□□□ -0.8
AC004540.1-206ENST00000448056 PRKAR2BP31323 418 aa10.02□□□□□ -0.81
AC004540.1-206ENST00000448056 PLEKHO1Q53GL0 409 aaPredicted RBP10.02□□□□□ -0.81
AC004540.1-206ENST00000448056 FAM9BQ8IZU0 186 aa10.02□□□□□ -0.81
AC004540.1-206ENST00000448056 ZCRB1Q8TBF4 217 aaKnown RBP10.02□□□□□ -0.81
AC004540.1-206ENST00000448056 PHACTR3Q96KR7 559 aa10.02□□□□□ -0.81
AC004540.1-206ENST00000448056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.02□□□□□ -0.81
AC004540.1-206ENST00000448056 RGPD1P0DJD0 1748 aa10.02□□□□□ -0.81
AC004540.1-206ENST00000448056 DISP2A7MBM2 1401 aa10.01□□□□□ -0.81
AC004540.1-206ENST00000448056 A0A0G2JS52 829 aa10.01□□□□□ -0.81
AC004540.1-206ENST00000448056 MYT1Q01538 1121 aa10.01□□□□□ -0.81
AC004540.1-206ENST00000448056 DDB1Q16531 1140 aa10.01□□□□□ -0.81
AC004540.1-206ENST00000448056 AMOTQ4VCS5 1084 aa10.01□□□□□ -0.81
AC004540.1-206ENST00000448056 SPG7Q9UQ90 795 aa10.01□□□□□ -0.81
AC004540.1-206ENST00000448056 FAM208AQ9UK61 1670 aaKnown RBP10.01□□□□□ -0.81
AC004540.1-206ENST00000448056 RGPD2P0DJD1 1756 aa10.01□□□□□ -0.81
AC004540.1-206ENST00000448056 GLI3P10071 1580 aa10.01□□□□□ -0.81
AC004540.1-206ENST00000448056 CCDC146Q8IYE0 955 aa10□□□□□ -0.81
AC004540.1-206ENST00000448056 RUNDC1Q96C34 613 aa10□□□□□ -0.81
AC004540.1-206ENST00000448056 MEGF6O75095 1541 aa10□□□□□ -0.81
AC004540.1-206ENST00000448056 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
AC004540.1-206ENST00000448056 C19orf67A6NJJ6 358 aa9.99□□□□□ -0.81
AC004540.1-206ENST00000448056 RGL2O15211 777 aa9.99□□□□□ -0.81
AC004540.1-206ENST00000448056 NEFMP07197 916 aa9.99□□□□□ -0.81
AC004540.1-206ENST00000448056 PDE3BQ13370 1112 aa9.99□□□□□ -0.81
AC004540.1-206ENST00000448056 MTHFSDQ2M296 383 aaKnown RBP9.99□□□□□ -0.81
AC004540.1-206ENST00000448056 DDX54Q8TDD1 881 aaKnown RBP9.99□□□□□ -0.81
AC004540.1-206ENST00000448056 PLEKHG2Q9H7P9 1386 aa9.99□□□□□ -0.81
AC004540.1-206ENST00000448056 CYP27B1O15528 508 aa9.98□□□□□ -0.81
AC004540.1-206ENST00000448056 KRT27Q7Z3Y8 459 aa9.98□□□□□ -0.81
AC004540.1-206ENST00000448056 MARCH10Q8NA82 808 aaPredicted RBP9.98□□□□□ -0.81
AC004540.1-206ENST00000448056 PHKG2P15735 406 aa9.97□□□□□ -0.81
AC004540.1-206ENST00000448056 ZNF530Q6P9A1 599 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms