RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 RPAP2Q8IXW5 612 aaPredicted RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 IFT57Q9NWB7 429 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 CDC37Q16543 378 aaPredicted RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 MSL3Q8N5Y2 521 aaKnown RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 ARFGAP2Q8N6H7 521 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 NCOA1Q15788 1441 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 CTIFO43310 598 aaKnown RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 TNNT1P13805 278 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 CCDC57Q2TAC2 916 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 WDR7Q9Y4E6 1490 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 CHUKO15111 745 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 DNAJC8O75937 253 aaPredicted RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 ISM2Q6H9L7 571 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 CCDC97Q96F63 343 aaPredicted RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 ATP2B1P20020 1258 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 ICA1Q05084 483 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 NBPF8Q3BBV2 869 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 CEP104O60308 925 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 SNRNP27Q8WVK2 155 aaKnown RBP3.43□□□□□ -1.86
CHD9-203ENST00000447540 CLUAP1Q96AJ1 413 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 NRDE2Q9H7Z3 1164 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 ZBTB17Q13105 803 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 CCDC186Q7Z3E2 898 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 WDR66Q8TBY9 1149 aa3.43□□□□□ -1.86
CHD9-203ENST00000447540 XPCQ01831 940 aaPredicted RBP3.42□□□□□ -1.86
CHD9-203ENST00000447540 CCDC73Q6ZRK6 1079 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 LARP6Q9BRS8 491 aaKnown RBP3.42□□□□□ -1.86
CHD9-203ENST00000447540 TBC1D2Q9BYX2 928 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 BCL2L12Q9HB09 334 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 PRDM10Q9NQV6 1147 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 SGSM2O43147 1006 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 LUC7L3O95232 432 aaKnown RBP3.42□□□□□ -1.86
CHD9-203ENST00000447540 CCDC183Q5T5S1 534 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 WDR63Q8IWG1 891 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 NLRP5P59047 1200 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 FAM76AQ8TAV0 307 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 ARHGAP35Q9NRY4 1499 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 ZSCAN12O43309 604 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 DHX16O60231 1041 aaKnown RBP3.42□□□□□ -1.86
CHD9-203ENST00000447540 DBN1Q16643 649 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 RCSD1Q6JBY9 416 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 CCDC65Q8IXS2 484 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 MAML3Q96JK9 1138 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 CRACR2AQ9BSW2 395 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 ANKRD7Q92527 254 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 CHCHD3Q9NX63 227 aaKnown RBP3.42□□□□□ -1.86
CHD9-203ENST00000447540 GJC2Q5T442 439 aaPredicted RBP3.42□□□□□ -1.86
CHD9-203ENST00000447540 KCNH8Q96L42 1107 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 TCHPQ9BT92 498 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 ANTXR1Q9H6X2 564 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 DDX19BQ9UMR2 479 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 MYO1CO00159 1063 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 HMGB3O15347 200 aaKnown RBP3.42□□□□□ -1.86
CHD9-203ENST00000447540 VGLL3A8MV65 326 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 BUB1BO60566 1050 aaPredicted RBP3.42□□□□□ -1.86
CHD9-203ENST00000447540 SFSWAPQ12872 951 aaKnown RBP3.42□□□□□ -1.86
CHD9-203ENST00000447540 CCHCR1Q8TD31 782 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 PANK2Q9BZ23 570 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 ACTN2P35609 894 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 PSEN1P49768 467 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 ARMC9Q7Z3E5 817 aa3.42□□□□□ -1.86
CHD9-203ENST00000447540 KCNJ6P48051 423 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 NEXNQ0ZGT2 675 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 BRD3Q15059 726 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 KIF4BQ2VIQ3 1234 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 TUBA8Q9NY65 449 aaPredicted RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 MAP3K5Q99683 1374 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 IQUBQ8NA54 791 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 ZNF830Q96NB3 372 aaPredicted RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 KANK1Q14678 1352 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 BECN2A8MW95 431 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 CCDC83Q8IWF9 413 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 CECR2Q9BXF3 1484 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 CYP2C19P33261 490 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 SESN3P58005 492 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 FBXO18Q8NFZ0 1043 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 GFM2Q969S9 779 aaKnown RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 WIZO95785 1651 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 SKILP12757 684 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 CEP57Q86XR8 500 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 PDILTQ8N807 584 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 TPX2Q9ULW0 747 aaKnown RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 ZMAT2Q96NC0 199 aaKnown RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 LUC7LQ9NQ29 371 aaKnown RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 CCDC151A5D8V7 595 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 RAD51AP2Q09MP3 1159 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 TEX11Q8IYF3 940 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 TNPO1Q92973 898 aaKnown RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 LRRFIP2Q9Y608 721 aaKnown RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 TPD52L1Q16890 204 aaPredicted RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 CCDC40Q4G0X9 1142 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 INTS4Q96HW7 963 aaKnown RBP3.41□□□□□ -1.86
CHD9-203ENST00000447540 CRBNQ96SW2 442 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 RUFY1Q96T51 708 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 CUX1P39880 1505 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 KLHL33A6NCF5 533 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 FAM114A1Q8IWE2 563 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 CCDC150Q8NCX0 1101 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 SAAL1Q96ER3 474 aa3.41□□□□□ -1.86
CHD9-203ENST00000447540 HFM1A2PYH4 1435 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms