RNA–Protein interactions for RNA: ENST00000367881.9

TMCO1-201, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-201ENST00000367881 BECN1Q14457 450 aa13.67□□□□□ -0.22
TMCO1-201ENST00000367881 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
TMCO1-201ENST00000367881 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
TMCO1-201ENST00000367881 KIAA0232Q92628 1395 aa13.67□□□□□ -0.22
TMCO1-201ENST00000367881 LMO7Q8WWI1 1683 aa13.67□□□□□ -0.22
TMCO1-201ENST00000367881 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
TMCO1-201ENST00000367881 CANXP27824 592 aaKnown RBP13.67□□□□□ -0.22
TMCO1-201ENST00000367881 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
TMCO1-201ENST00000367881 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
TMCO1-201ENST00000367881 HAP1P54257 671 aaPredicted RBP13.66□□□□□ -0.22
TMCO1-201ENST00000367881 TCP11L2Q8N4U5 519 aa13.66□□□□□ -0.22
TMCO1-201ENST00000367881 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
TMCO1-201ENST00000367881 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
TMCO1-201ENST00000367881 SULT6B1Q6IMI4 303 aa13.66□□□□□ -0.22
TMCO1-201ENST00000367881 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
TMCO1-201ENST00000367881 EYA1Q99502 592 aa13.66□□□□□ -0.22
TMCO1-201ENST00000367881 AXIN2Q9Y2T1 843 aa13.66□□□□□ -0.22
TMCO1-201ENST00000367881 IGSF1Q8N6C5 1336 aa13.65□□□□□ -0.22
TMCO1-201ENST00000367881 AEBP1Q8IUX7 1158 aa13.65□□□□□ -0.22
TMCO1-201ENST00000367881 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
TMCO1-201ENST00000367881 KDRP35968 1356 aa13.64□□□□□ -0.23
TMCO1-201ENST00000367881 SLC4A3P48751 1232 aa13.64□□□□□ -0.23
TMCO1-201ENST00000367881 COL14A1Q05707 1796 aaKnown RBP13.63□□□□□ -0.23
TMCO1-201ENST00000367881 IGHDP01880 384 aa13.63□□□□□ -0.23
TMCO1-201ENST00000367881 UPF2Q9HAU5 1272 aaKnown RBP13.63□□□□□ -0.23
TMCO1-201ENST00000367881 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
TMCO1-201ENST00000367881 ANKRD24Q8TF21 1146 aa13.63□□□□□ -0.23
TMCO1-201ENST00000367881 FRAT1Q92837 279 aaPredicted RBP13.63□□□□□ -0.23
TMCO1-201ENST00000367881 PRDM11Q9NQV5 511 aa13.63□□□□□ -0.23
TMCO1-201ENST00000367881 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
TMCO1-201ENST00000367881 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
TMCO1-201ENST00000367881 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
TMCO1-201ENST00000367881 ERBB3P21860 1342 aa13.62□□□□□ -0.23
TMCO1-201ENST00000367881 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
TMCO1-201ENST00000367881 PLCH1Q4KWH8 1693 aa13.61□□□□□ -0.23
TMCO1-201ENST00000367881 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
TMCO1-201ENST00000367881 RARSP54136 660 aaKnown RBP13.61□□□□□ -0.23
TMCO1-201ENST00000367881 NBPF6Q5VWK0 638 aa13.61□□□□□ -0.23
TMCO1-201ENST00000367881 NBPF4Q96M43 638 aa13.61□□□□□ -0.23
TMCO1-201ENST00000367881 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
TMCO1-201ENST00000367881 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
TMCO1-201ENST00000367881 KCNA4P22459 653 aa13.6□□□□□ -0.23
TMCO1-201ENST00000367881 MYH16Q9H6N6 1097 aa13.6□□□□□ -0.23
TMCO1-201ENST00000367881 COG6Q9Y2V7 657 aa13.6□□□□□ -0.23
TMCO1-201ENST00000367881 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
TMCO1-201ENST00000367881 COL5A2P05997 1499 aaPredicted RBP13.59□□□□□ -0.23
TMCO1-201ENST00000367881 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
TMCO1-201ENST00000367881 PANK1Q8TE04 598 aa13.59□□□□□ -0.23
TMCO1-201ENST00000367881 RWDD1Q9H446 243 aaPredicted RBP13.59□□□□□ -0.23
TMCO1-201ENST00000367881 FAM83GA6ND36 823 aa13.58□□□□□ -0.24
TMCO1-201ENST00000367881 RIPK4P57078 832 aa13.58□□□□□ -0.24
TMCO1-201ENST00000367881 NRAPQ86VF7 1730 aa13.57□□□□□ -0.24
TMCO1-201ENST00000367881 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
TMCO1-201ENST00000367881 TRIM35Q9UPQ4 493 aa13.57□□□□□ -0.24
TMCO1-201ENST00000367881 JCADQ9P266 1359 aa13.57□□□□□ -0.24
TMCO1-201ENST00000367881 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
TMCO1-201ENST00000367881 NLRP2Q9NX02 1062 aa13.56□□□□□ -0.24
TMCO1-201ENST00000367881 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
TMCO1-201ENST00000367881 TBC1D32Q96NH3 1257 aa13.55□□□□□ -0.24
TMCO1-201ENST00000367881 BRPF3Q9ULD4 1205 aa13.55□□□□□ -0.24
TMCO1-201ENST00000367881 WDR17Q8IZU2 1322 aa13.55□□□□□ -0.24
TMCO1-201ENST00000367881 NUTM2BA6NNL0 878 aaPredicted RBP13.55□□□□□ -0.24
TMCO1-201ENST00000367881 NUTM2EB1AL46 878 aaPredicted RBP13.55□□□□□ -0.24
TMCO1-201ENST00000367881 NUTM2AQ8IVF1 878 aaPredicted RBP13.55□□□□□ -0.24
TMCO1-201ENST00000367881 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
TMCO1-201ENST00000367881 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
TMCO1-201ENST00000367881 PKD1L3Q7Z443 1732 aa13.54□□□□□ -0.24
TMCO1-201ENST00000367881 WNK3Q9BYP7 1800 aa13.54□□□□□ -0.24
TMCO1-201ENST00000367881 HSPA1LP34931 641 aa13.54□□□□□ -0.24
TMCO1-201ENST00000367881 MVPQ14764 893 aaKnown RBP13.54□□□□□ -0.24
TMCO1-201ENST00000367881 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
TMCO1-201ENST00000367881 BTG4Q9NY30 223 aa13.53□□□□□ -0.24
TMCO1-201ENST00000367881 LMOD3Q0VAK6 560 aa13.52□□□□□ -0.24
TMCO1-201ENST00000367881 ZKSCAN2Q63HK3 967 aa13.52□□□□□ -0.24
TMCO1-201ENST00000367881 FAM43AQ8N2R8 423 aa13.52□□□□□ -0.24
TMCO1-201ENST00000367881 GAS2L2Q8NHY3 880 aa13.52□□□□□ -0.24
TMCO1-201ENST00000367881 STRN4Q9NRL3 753 aa13.52□□□□□ -0.24
TMCO1-201ENST00000367881 MEGF6O75095 1541 aa13.52□□□□□ -0.25
TMCO1-201ENST00000367881 EVA1CP58658 441 aa13.52□□□□□ -0.25
TMCO1-201ENST00000367881 TOM1L2Q6ZVM7 507 aa13.52□□□□□ -0.25
TMCO1-201ENST00000367881 ANTXR1Q9H6X2 564 aa13.52□□□□□ -0.25
TMCO1-201ENST00000367881 RTN4Q9NQC3 1192 aaKnown RBP13.52□□□□□ -0.25
TMCO1-201ENST00000367881 PDZRN3Q9UPQ7 1066 aa13.52□□□□□ -0.25
TMCO1-201ENST00000367881 PCDHB15Q9Y5E8 787 aa13.52□□□□□ -0.25
TMCO1-201ENST00000367881 LRRC37A3O60309 1634 aa13.52□□□□□ -0.25
TMCO1-201ENST00000367881 SHANK3Q9BYB0 1731 aa13.51□□□□□ -0.25
TMCO1-201ENST00000367881 SEC24BO95487 1268 aa13.51□□□□□ -0.25
TMCO1-201ENST00000367881 LARP1Q6PKG0 1096 aaKnown RBP13.51□□□□□ -0.25
TMCO1-201ENST00000367881 CRB1P82279 1406 aa13.5□□□□□ -0.25
TMCO1-201ENST00000367881 IL16Q14005 1332 aa13.5□□□□□ -0.25
TMCO1-201ENST00000367881 SCN11AQ9UI33 1791 aa13.5□□□□□ -0.25
TMCO1-201ENST00000367881 RLBP1P12271 317 aa13.5□□□□□ -0.25
TMCO1-201ENST00000367881 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
TMCO1-201ENST00000367881 THUMPD2Q9BTF0 503 aaKnown RBP13.5□□□□□ -0.25
TMCO1-201ENST00000367881 SPATA31A6Q5VVP1 1343 aa13.5□□□□□ -0.25
TMCO1-201ENST00000367881 LRP6O75581 1613 aa13.5□□□□□ -0.25
TMCO1-201ENST00000367881 HDAC1Q13547 482 aaPredicted RBP13.49□□□□□ -0.25
TMCO1-201ENST00000367881 FTSJ3Q8IY81 847 aaKnown RBP13.49□□□□□ -0.25
TMCO1-201ENST00000367881 DZIP1LQ8IYY4 767 aaKnown RBP13.49□□□□□ -0.25
TMCO1-201ENST00000367881 CARD10Q9BWT7 1032 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms