RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CLDN16Q9Y5I7 305 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 ATG2AQ2TAZ0 1938 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 TTC28Q96AY4 2481 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 A0A0C4DFX4 3053 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 CHD7Q9P2D1 2997 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 COL4A4P53420 1690 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 NRCAMQ92823 1304 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 KLF18A0A0U1RQI7 1052 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 FAM90A7PA6NKC0 464 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 BECN2A8MW95 431 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 FAM90A22PA8MWA6 464 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 FAM90A12PA8MX19 464 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 FAM90A23PA8MXZ1 464 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 FAM157AC9JC47 383 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 TNFRSF13BO14836 293 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 SPTLC2O15270 562 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 INSIG1O15503 277 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 ATP9AO75110 1047 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 SERPINC1P01008 464 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 IL1AP01583 271 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 LGALS2P05162 132 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 CYP1A2P05177 515 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 MYZAPP0CAP1 466 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 ACTN1P12814 892 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 SCG2P13521 617 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 ENO3P13929 434 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 ARSBP15848 533 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 IFNAR1P17181 557 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 CD72P21854 359 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 AVPR1AP37288 418 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 METAP2P50579 478 aaKnown RBP eCLIP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 CCR5P51681 352 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 PGGT1BP53609 377 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 CCL23P55773 120 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 GPNMBQ14956 572 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 RPE65Q16518 533 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 SLC18A3Q16572 532 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 TMEM95Q3KNT9 176 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 DCAF12L2Q5VW00 463 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 HEPHL1Q6MZM0 1159 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 Q6ZTK2 550 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 RUFY3Q7L099 469 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 Q7L0L9 218 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 LRRC8DQ7L1W4 858 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 SERPINA11Q86U17 422 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 SERINC5Q86VE9 423 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 LRRTM4Q86VH4 590 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 GHDCQ8N2G8 530 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 C9orf106Q8NAJ2 232 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 CEP76Q8TAP6 659 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 CCDC12Q8WUD4 166 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 PIBF1Q8WXW3 757 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 SEPT1Q8WYJ6 367 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 ZNF274Q96GC6 653 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 TCEANC2Q96MN5 208 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 JAKMIP1Q96N16 626 aaKnown RBP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 GUCD1Q96NT3 240 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 CLSTN3Q9BQT9 956 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 MXRA8Q9BRK3 442 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 WACQ9BTA9 647 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 RBM38Q9H0Z9 239 aaKnown RBP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 KLHL31Q9H511 634 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 SH3GLB2Q9NR46 395 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 ZNF215Q9UL58 517 aaPredicted RBP3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 ARID2Q68CP9 1835 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 KIAA1671Q9BY89 1806 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 MYO7AQ13402 2215 aa3.78□□□□□ -1.8
CKS1BP3-201ENST00000600888 BDP1A6H8Y1 2624 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 UNC80Q8N2C7 3258 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 IGLV3-22A0A075B6J6 115 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 IGKV6D-21A0A0A0MT36 114 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 GSTTP1A0A1W2PQM5 241 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 MBLAC1A4D2B0 266 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 SMCO2A6NFE2 343 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 I6L893 689 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 ALPLP05186 524 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 CHRM4P08173 479 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZNF286BP0CG31 522 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 SMIM10L2AP0DMW4 78 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 SMIM10L2BP0DMW5 78 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 YWHAQP27348 245 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 GNA11P29992 359 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 RFC1P35251 1148 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 TCF7P36402 384 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 RFX2P48378 723 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 PPP3CCP48454 512 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 SLC26A2P50443 739 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 NAPAP54920 295 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 FHL1Q13642 323 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 GPR18Q14330 331 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 UBE2SQ16763 222 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 CEP55Q53EZ4 464 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 ATG16L1Q676U5 607 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 GALNT17Q6IS24 598 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 LVRNQ6Q4G3 990 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 PLPPR4Q7Z2D5 763 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 TMC8Q8IU68 726 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 SMAP1Q8IYB5 467 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 EXOC8Q8IYI6 725 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms