RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ZNF514Q96K75 400 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 ARFGAP3Q9NP61 516 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 CASS4Q9NQ75 786 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 SPATS2LQ9NUQ6 558 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 NLE1Q9NVX2 485 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 RNF14Q9UBS8 474 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 KLK13Q9UKR3 277 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 TDRD6O60522 2096 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 NCOR2Q9Y618 2525 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 NOBOXO60393 691 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 RALBP11234 206 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 ACP5P13686 325 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 PNLIPP16233 465 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 SPINK2P20155 84 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 ADRA1DP25100 572 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 CLCNKAP51800 687 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 XIAPP98170 497 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 NFATC2Q13469 925 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 ZNF648Q5T619 568 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 GPRC6AQ5T6X5 926 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 HES3Q5TGS1 186 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 CCNI2Q6ZMN8 369 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 SNX20Q7Z614 316 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 DCUN1D1Q96GG9 259 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 RANBP9Q96S59 729 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 PIH1D1Q9NWS0 290 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 CRLS1Q9UJA2 301 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 TMPRSS11EQ9UL52 423 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 RIMKLBQ9ULI2 386 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 PRKAB1Q9Y478 270 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 PLEKHM1Q9Y4G2 1056 aa17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 DNMT3AQ9Y6K1 912 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-212ENST00000596163 ARID1BQ8NFD5 2236 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 MROH6A6NGR9 719 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 OR5K4A6NMS3 321 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 CFAP99D6REC4 459 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 H7C0S8 307 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 GAPDHSO14556 408 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 ZNF185O15231 689 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 NUDT21O43809 227 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 MTX2O75431 263 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 ZNF7P17097 686 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 TPSB2P20231 275 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 AKT1P31749 480 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 MC4RP32245 332 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 PAFAH1B1P43034 410 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 NPY2RP49146 381 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 INSM1Q01101 510 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 GPS1Q13098 491 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 HLTFQ14527 1009 aaKnown RBP eCLIP17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 TPSAB1Q15661 275 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 INSCQ1MX18 579 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 CERCAMQ5T4B2 595 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 TTC27Q6P3X3 843 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 PPHLN1Q8NEY8 458 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 CDKN2AIPNLQ96HQ2 116 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 DNAJC1Q96KC8 554 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 RUNDC3BQ96NL0 473 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 CCDC3Q9BQI4 270 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 TIMM29Q9BSF4 260 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 KLC4Q9NSK0 619 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 SMARCAL1Q9NZC9 954 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 BFARQ9NZS9 450 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 LRIT1Q9P2V4 623 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 CLCA2Q9UQC9 943 aa17.06■□□□□ 0.32
SHKBP1-212ENST00000596163 RHPN2P1A8MT19 583 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 ECEL1O95672 775 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 MT-CO3P00414 261 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 GRIA1P42261 906 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 TRIP13Q15645 432 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 ZRANB3Q5FWF4 1079 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 PCID2Q5JVF3 399 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 PERM1Q5SV97 790 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 CRTC3Q6UUV7 619 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 C17orf82Q86X59 251 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 TRAPPC5Q8IUR0 188 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 AVL9Q8NBF6 648 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 PEX13Q92968 403 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 CCDC74AQ96AQ1 378 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 DEPDC7Q96QD5 511 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 TTC1Q99614 292 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 IL22Q9GZX6 179 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 STN1Q9H668 368 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 KCNK6Q9Y257 313 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 ST14Q9Y5Y6 855 aa17.05■□□□□ 0.32
SHKBP1-212ENST00000596163 KLHL33A6NCF5 533 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 AGAP14A8MT82 685 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 TCEA3O75764 348 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 PSMA3P25788 255 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 VPS41P49754 854 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 CACNG1Q06432 222 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 PPP1R7Q15435 360 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 KHDC1Q4VXA5 237 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 TSTD2Q5T7W7 516 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 LRRC8BQ6P9F7 803 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 TMEM220Q6QAJ8 160 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 TAS2R42Q7RTR8 314 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 NAGSQ8N159 534 aa17.04■□□□□ 0.32
SHKBP1-212ENST00000596163 NXPE1Q8N323 547 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms