RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PANX3Q96QZ0 392 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 P2RY13Q9BPV8 354 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 ZSCAN5AQ9BUG6 496 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 SPATA16Q9BXB7 569 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 ILKAPQ9H0C8 392 aaPredicted RBP13.66□□□□□ -0.22
TPM1-215ENST00000558868 ALG9Q9H6U8 611 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 ACTR5Q9H9F9 607 aaPredicted RBP13.66□□□□□ -0.22
TPM1-215ENST00000558868 DCTN4Q9UJW0 460 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 DNAJC16Q9Y2G8 782 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 NUMBLQ9Y6R0 609 aa13.66□□□□□ -0.22
TPM1-215ENST00000558868 MUC22E2RYF6 1773 aaPredicted RBP13.66□□□□□ -0.22
TPM1-215ENST00000558868 MYO9BQ13459 2157 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 SLCO1B7G3V0H7 640 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 QSOX1O00391 747 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 ITM2AO43736 263 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 MAGEC1O60732 1142 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 KERAO60938 352 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 IPO13O94829 963 aaKnown RBP13.65□□□□□ -0.22
TPM1-215ENST00000558868 EPHX1P07099 455 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 OR56A5P0C7T3 313 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 ELFN1P0C7U0 828 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 IL12RB1P42701 662 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 NAGLUP54802 743 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 SEMG2Q02383 582 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 ZBTB16Q05516 673 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 RALGDSQ12967 914 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 PRKAA1Q13131 559 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 SPDYAQ5MJ70 313 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 CES4AQ5XG92 561 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 AFAP1L2Q8N4X5 818 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 CD200R1Q8TD46 325 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 KCNV2Q8TDN2 545 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 DCUN1D1Q96GG9 259 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 FAM129BQ96TA1 746 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
TPM1-215ENST00000558868 TRMOQ9BU70 441 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 TMEM120AQ9BXJ8 343 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 HDAC8Q9BY41 377 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 EML4Q9HC35 981 aaKnown RBP13.65□□□□□ -0.22
TPM1-215ENST00000558868 TRPV5Q9NQA5 729 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 LATS2Q9NRM7 1088 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 RNF112Q9ULX5 631 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 MED16Q9Y2X0 877 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 RAP2CQ9Y3L5 183 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 STON1Q9Y6Q2 735 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 COL4A3Q01955 1670 aa13.65□□□□□ -0.22
TPM1-215ENST00000558868 IGLV3-16A0A075B6K0 115 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 A8MT66 165 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 WNT9AO14904 365 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 ZBTB14O43829 449 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 LYPLA1O75608 230 aaPredicted RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 AP2A2O94973 939 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 CBSLP0DN79 551 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 BMP1P13497 986 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 IMPDH1P20839 514 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 DGKAP23743 735 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 CBSP35520 551 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 GALK1P51570 392 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 CLCN7P51798 805 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 ENPP2Q13822 863 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 ACOX1Q15067 660 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 ATP13A5Q4VNC0 1218 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 SETMARQ53H47 684 aaPredicted RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 LRRC73Q5JTD7 316 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 EGFLAMQ63HQ2 1017 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 SDE2Q6IQ49 451 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 LIPIQ6XZB0 460 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 TRIM67Q6ZTA4 783 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 ERN2Q76MJ5 926 aaKnown RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 ZNF765Q7L2R6 523 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 CYP2U1Q7Z449 544 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 HSD11B1LQ7Z5J1 315 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 TECPR1Q7Z6L1 1165 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 ALYREFQ86V81 257 aaKnown RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 PLCD3Q8N3E9 789 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 CCNYL1Q8N7R7 359 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 SIDT2Q8NBJ9 832 aaKnown RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 TXNDC5Q8NBS9 432 aaKnown RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 ARRDC3Q96B67 414 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 CHFRQ96EP1 664 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 SGF29Q96ES7 293 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 LINGO1Q96FE5 620 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 RMDN2Q96LZ7 410 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 SORT1Q99523 831 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 RPP25Q9BUL9 199 aaKnown RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 UNKQ9C0B0 810 aaKnown RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 C20orf27Q9GZN8 174 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 TTYH1Q9H313 450 aaPredicted RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 C8orf33Q9H7E9 229 aaPredicted RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 FBRSQ9HAH7 460 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 KCNK13Q9HB14 408 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 SARS2Q9NP81 518 aaKnown RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 PRSS16Q9NQE7 514 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 SPATS2LQ9NUQ6 558 aaKnown RBP13.64□□□□□ -0.23
TPM1-215ENST00000558868 ABCF3Q9NUQ8 709 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 KCTD5Q9NXV2 234 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 VTI1BQ9UEU0 232 aa13.64□□□□□ -0.23
TPM1-215ENST00000558868 HAO1Q9UJM8 370 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms