RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 ARSEP51690 589 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 GFERP55789 205 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 MC1RQ01726 317 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 GBE1Q04446 702 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ABHD18Q0P651 414 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 SEPT6Q14141 434 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 INSCQ1MX18 579 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF569Q5MCW4 686 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 FAM182AQ5T1J6 154 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 PLXDC1Q8IUK5 500 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 MAP7D3Q8IWC1 876 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 CCDC13Q8IYE1 715 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ESX1Q8N693 406 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 FAM71BQ8TC56 605 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 APOBEC4Q8WW27 367 aaKnown RBP11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ABHD17AQ96GS6 310 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 MRFAP1L1Q96HT8 127 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ELMO2Q96JJ3 720 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF830Q96NB3 372 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-203ENST00000546881 TGM7Q96PF1 710 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 TSGA13Q96PP4 275 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 PLEKHG4BQ96PX9 1271 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 LYSMD1Q96S90 227 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF670Q9BS34 389 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ADGRE3Q9BY15 652 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ULBP3Q9BZM4 244 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 SPRY4Q9C004 299 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 CARD9Q9H257 536 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 TRIT1Q9H3H1 467 aaKnown RBP11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ABHD10Q9NUJ1 306 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 CTTNBP2NLQ9P2B4 639 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 AMACRQ9UHK6 382 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 ANAPC2Q9UJX6 822 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 SHOC2Q9UQ13 582 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 DNAJC16Q9Y2G8 782 aa11.33□□□□□ -0.6
RAB5C-203ENST00000546881 MRPS18BQ9Y676 258 aaKnown RBP11.33□□□□□ -0.6
RAB5C-203ENST00000546881 UBR5O95071 2799 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-203ENST00000546881 BSNQ9UPA5 3926 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 A6NCN8 305 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 ANKRD66B4E2M5 251 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 AKR1B10O60218 316 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 RASSF9O75901 435 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 SLC25A14O95258 325 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-203ENST00000546881 VIPP01282 170 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 DLSTP36957 453 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 CASRP41180 1078 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 STAT5AP42229 794 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 PDK2Q15119 407 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 PCSK7Q16549 785 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 ALKBH5Q6P6C2 394 aaKnown RBP11.32□□□□□ -0.6
RAB5C-203ENST00000546881 RASGRP3Q8IV61 690 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 RAVER1Q8IY67 606 aaKnown RBP11.32□□□□□ -0.6
RAB5C-203ENST00000546881 AVL9Q8NBF6 648 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 CEP41Q9BYV8 373 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 EPB41L1Q9H4G0 881 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 ZFYVE1Q9HBF4 777 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 SCHIP1Q9P0W5 487 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-203ENST00000546881 TMEM184BQ9Y519 407 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-203ENST00000546881 HEY1Q9Y5J3 304 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 RPS6KL1Q9Y6S9 549 aa11.32□□□□□ -0.6
RAB5C-203ENST00000546881 RGSL1A5PLK6 1076 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 LILRA5A6NI73 299 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 MTX2O75431 263 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 KATNA1O75449 491 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 UBXN7O94888 489 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 PROSCO94903 275 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 DLGAP3O95886 979 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 MMP2P08253 660 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 KRT7P08729 469 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF28P17035 718 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 LEPRP48357 1165 aaKnown RBP11.31□□□□□ -0.6
RAB5C-203ENST00000546881 TAS2R40P59535 323 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 UBE2IP63279 158 aaKnown RBP11.31□□□□□ -0.6
RAB5C-203ENST00000546881 SH3BP2P78314 561 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 FOXK1P85037 733 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 SRSF1Q07955 248 aaKnown RBP eCLIP11.31□□□□□ -0.6
RAB5C-203ENST00000546881 AP1B1Q10567 949 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 SLC10A2Q12908 348 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-203ENST00000546881 ZBTB17Q13105 803 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 UBAP2LQ14157 1087 aaKnown RBP11.31□□□□□ -0.6
RAB5C-203ENST00000546881 LACTB2Q53H82 288 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-203ENST00000546881 C6orf15Q6UXA7 325 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-203ENST00000546881 TMEM26Q6ZUK4 368 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 ADGRG6Q86SQ4 1221 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 PQLC3Q8N755 202 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 GALNT6Q8NCL4 622 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 GPR26Q8NDV2 337 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 FATE1Q969F0 183 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 HDAC11Q96DB2 347 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 STAMBPL1Q96FJ0 436 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 C9orf72Q96LT7 481 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 CCDC42Q96M95 316 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 OR6C1Q96RD1 312 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 DNAJC7Q99615 494 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 GPR63Q9BZJ6 419 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 BRD8Q9H0E9 1235 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 TRIM39Q9HCM9 518 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 DTLQ9NZJ0 730 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 OGFRQ9NZT2 677 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 ANKMY1Q9P2S6 941 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms