RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MCCP23508 829 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 PIK3R1P27986 724 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 RBMS1P29558 406 aaKnown RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 SHMT1P34896 483 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 CLDN20P56880 219 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 TAS2R38P59533 333 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 POU5F1Q01860 360 aaKnown RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 FOXD4Q12950 439 aaPredicted RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 NFATC2Q13469 925 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 NAE1Q13564 534 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 HNRNPDQ14103 355 aaKnown RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 NAA25Q14CX7 972 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 DECR1Q16698 335 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 HIST2H2ACQ16777 129 aaPredicted RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 MYLK3Q32MK0 819 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 CTXN3Q4LDR2 81 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 HIGD2BQ4VC39 106 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 WLSQ5T9L3 541 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 FHL5Q5TD97 284 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 ARHGEF16Q5VV41 709 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 SIGIRRQ6IA17 410 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 ZNF280DQ6N043 979 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 PSRC1Q6PGN9 363 aaPredicted RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 PACS1Q6VY07 963 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 TADA2BQ86TJ2 420 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 CCAR1Q8IX12 1150 aaKnown RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 LSMEM2Q8N112 164 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 POM121L12Q8N7R1 296 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 ATG16L2Q8NAA4 619 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 TMEM178AQ8NBL3 297 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 ACVR1CQ8NER5 493 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 PRSS33Q8NF86 280 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 HUS1BQ8NHY5 278 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 SDCCAG3Q96C92 435 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 RHBDF1Q96CC6 855 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 GRAMD2BQ96HH9 432 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 OXNAD1Q96HP4 312 aaPredicted RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 TNIP3Q96KP6 325 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 CNOT6LQ96LI5 555 aaKnown RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 BBS4Q96RK4 519 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 CD180Q99467 661 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 FAM110AQ9BQ89 295 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 PUS3Q9BZE2 481 aaKnown RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 KAT14Q9H8E8 782 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 ARFGAP3Q9NP61 516 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 ALKBH4Q9NXW9 302 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 PTTG2Q9NZH5 202 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 COQ3Q9NZJ6 369 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 IL1RAPL1Q9NZN1 696 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 NYAP2Q9P242 653 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 THEGQ9P2T0 379 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 CTNNAL1Q9UBT7 734 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 MUTYHQ9UIF7 546 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 POMT2Q9UKY4 750 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 EXO1Q9UQ84 846 aaKnown RBP0.68□□□□□ -2.3
COPB1-212ENST00000534771 DERAQ9Y315 318 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 RABGAP1Q9Y3P9 1069 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 ZNF318Q5VUA4 2279 aa0.68□□□□□ -2.3
COPB1-212ENST00000534771 IGHV3OR16-10A0A075B7F0 116 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 MEX3AA1L020 520 aaKnown RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 FAM90A7PA6NKC0 464 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 C15orf62A8K5M9 175 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 FAM90A22PA8MWA6 464 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 FAM90A12PA8MX19 464 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 FAM90A23PA8MXZ1 464 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 EPM2AB3EWF7 344 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 STX16-NPEPL1H3BU86 382 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 PLK4O00444 970 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 SOCS3O14543 225 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 STX16O14662 325 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 HS3ST1O14792 307 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 SEC14L5O43304 696 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 IDH3BO43837 385 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 NXPH2O95156 264 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 CSPG5O95196 566 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 TFP02787 698 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 HEXAP06865 529 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 LIPFP07098 398 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 GP9P14770 177 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 EDN2P20800 178 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 POU1F1P28069 291 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 CST5P28325 142 aaPredicted RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 EPHA2P29317 976 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 PPM1AP35813 382 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 NKX2-1P43699 371 aaPredicted RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 HUNKP57058 714 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 PAX8Q06710 450 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 DRP2Q13474 957 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 CUL4BQ13620 913 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 PPP2R5BQ15173 497 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 HLA-BQ31612 363 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 ZNF766Q5HY98 468 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 FAM83BQ5T0W9 1011 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 CYP4A22Q5TCH4 519 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 TANGO2Q6ICL3 276 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 LIN54Q6MZP7 749 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 FASTKD5Q7L8L6 764 aaKnown RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 CACNA2D4Q7Z3S7 1137 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 NRROSQ86YC3 692 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms