RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 CFAP99D6REC4 459 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ARHGAP33O14559 1287 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 RASGRP1O95267 797 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 CER1O95813 267 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ZNF806P0C7X5 589 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 RALBP11234 206 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 JUNDP17535 347 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ENGP17813 658 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ACRV1P26436 265 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ARNTP27540 789 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ECHS1P30084 290 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 PPARGP37231 505 aaPredicted RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 CTSKP43235 329 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 GNPDA1P46926 289 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 IL9RQ01113 521 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 BNC1Q01954 994 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 EIF2B5Q13144 721 aaKnown RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 DBN1Q16643 649 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ALG11Q2TAA5 492 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 AASDHQ4L235 1098 aaPredicted RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 KHDC1Q4VXA5 237 aaKnown RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 LYPLAL1Q5VWZ2 237 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 STEAP4Q687X5 459 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ZNF470Q6ECI4 717 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 NEPROQ6NW34 567 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 CRTC3Q6UUV7 619 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 IL27RAQ6UWB1 636 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ADGRG6Q86SQ4 1221 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 SDCCAG8Q86SQ7 713 aaPredicted RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 LDB1Q86U70 411 aaPredicted RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 PHACTR4Q8IZ21 702 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 UNC5BQ8IZJ1 945 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 OXR1Q8N573 874 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 DDHD1Q8NEL9 900 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 OR2I1PQ8NGU4 316 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 GABPB2Q8TAK5 448 aaPredicted RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 GSDMBQ8TAX9 411 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 CALML6Q8TD86 181 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 FAM167BQ9BTA0 163 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 ZDHHC5Q9C0B5 715 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 GAREM1Q9H706 876 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 CARS2Q9HA77 564 aaKnown RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 TRIM39Q9HCM9 518 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 GPR27Q9NS67 375 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 IARS2Q9NSE4 1012 aaKnown RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 ZDHHC3Q9NYG2 299 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 MARCH4Q9P2E8 410 aaPredicted RBP14.81□□□□□ -0.04
NUP54-213ENST00000513352 ATXN10Q9UBB4 475 aa14.81□□□□□ -0.04
NUP54-213ENST00000513352 PCDH15Q96QU1 1955 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 OTOGLQ3ZCN5 2332 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 TRBV5-4A0A0C4DH59 114 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 H3BM21 787 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 PFDN6O15212 129 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 VEGFDO43915 354 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 LRP3O75074 770 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 NDUFS3O75489 264 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 CDK14O94921 469 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 TNFP01375 233 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 CEACAM5P06731 702 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 ERVK-10P10266 1014 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 CTSEP14091 401 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 ZNF8P17098 575 aaPredicted RBP14.8□□□□□ -0.04
NUP54-213ENST00000513352 SSTR1P30872 391 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 ARCN1P48444 511 aaKnown RBP14.8□□□□□ -0.04
NUP54-213ENST00000513352 ARRB1P49407 418 aaPredicted RBP14.8□□□□□ -0.04
NUP54-213ENST00000513352 VSNL1P62760 191 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 SEMA3AQ14563 771 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 HLA-BQ31612 363 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 PLA2G4EQ3MJ16 856 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 HSP90AA5PQ58FG0 334 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 GALNT13Q8IUC8 556 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 TRAPPC5Q8IUR0 188 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 RBFAQ8N0V3 343 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 PNPLA1Q8N8W4 532 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 CERS2Q96G23 380 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 ELF4Q99607 663 aaPredicted RBP14.8□□□□□ -0.04
NUP54-213ENST00000513352 EDEM2Q9BV94 578 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 SLC13A1Q9BZW2 595 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 PARD6AQ9NPB6 346 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 VPS18Q9P253 973 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 APOBEC3BQ9UH17 382 aaKnown RBP14.8□□□□□ -0.04
NUP54-213ENST00000513352 ZNHIT2Q9UHR6 403 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 SUFUQ9UMX1 484 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 PRKAB1Q9Y478 270 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 GPSM3Q9Y4H4 160 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 LRP4O75096 1905 aa14.8□□□□□ -0.04
NUP54-213ENST00000513352 UBA6A0AVT1 1052 aaPredicted RBP14.79□□□□□ -0.04
NUP54-213ENST00000513352 LNP1A1A4G5 178 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 OR2AG2A6NM03 316 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 TNFRSF10CO14798 259 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 SDC3O75056 442 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 PBLDP30039 288 aaPredicted RBP14.79□□□□□ -0.04
NUP54-213ENST00000513352 TTPAP49638 278 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 BLKP51451 505 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 TMEM115Q12893 351 aaPredicted RBP14.79□□□□□ -0.04
NUP54-213ENST00000513352 SLMAPQ14BN4 828 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 CSRP2Q16527 193 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 KCTD16Q68DU8 428 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 TRMT10BQ6PF06 316 aaKnown RBP14.79□□□□□ -0.04
NUP54-213ENST00000513352 CERS6Q6ZMG9 384 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms