RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 ZRANB3Q5FWF4 1079 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 C6orf132Q5T0Z8 1188 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 TSTD2Q5T7W7 516 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 CRTC3Q6UUV7 619 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 SLC35F3Q8IY50 421 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 KYQ8NBH2 561 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 FAM46DQ8NEK8 389 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 DDHD1Q8NEL9 900 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 PPHLN1Q8NEY8 458 aaKnown RBP13.43□□□□□ -0.26
FDPS-219ENST00000495308 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 GPBAR1Q8TDU6 330 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 NAT14Q8WUY8 206 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 SLCO2A1Q92959 643 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 CCDC97Q96F63 343 aaPredicted RBP13.43□□□□□ -0.26
FDPS-219ENST00000495308 CDKN2AIPNLQ96HQ2 116 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 TRIM51Q9BSJ1 452 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 BOCQ9BWV1 1114 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 GSDMCQ9BYG8 508 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 CHRAC1Q9NRG0 131 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 TRNAU1APQ9NX07 287 aaKnown RBP13.43□□□□□ -0.26
FDPS-219ENST00000495308 CRLS1Q9UJA2 301 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 GPR34Q9UPC5 381 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 SLC30A1Q9Y6M5 507 aa13.43□□□□□ -0.26
FDPS-219ENST00000495308 RP1P56715 2156 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 ASXL3Q9C0F0 2248 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 MED19A0JLT2 244 aaPredicted RBP13.42□□□□□ -0.26
FDPS-219ENST00000495308 CCDC162PA2VCL2 907 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 H7C0S8 307 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 DNALI1O14645 258 aaPredicted RBP13.42□□□□□ -0.26
FDPS-219ENST00000495308 TPP1O14773 563 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 GRID2O43424 1007 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 VEGFDO43915 354 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 CDK14O94921 469 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 ACP5P13686 325 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 ITGALP20701 1170 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 ACTR1BP42025 376 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 NPY2RP49146 381 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 ACTR1AP61163 376 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 MRPS25P82663 173 aaKnown RBP13.42□□□□□ -0.26
FDPS-219ENST00000495308 GTF2H3Q13889 308 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 SKIDA1Q1XH10 827 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 LDLRAP1Q5SW96 308 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 SNX20Q7Z614 316 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 CAND1Q86VP6 1230 aaKnown RBP13.42□□□□□ -0.26
FDPS-219ENST00000495308 JAMLQ86YT9 394 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 NAT8LQ8N9F0 302 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 FAM181AQ8N9Y4 354 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 SPATA4Q8NEY3 305 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 SCG3Q8WXD2 468 aaKnown RBP13.42□□□□□ -0.26
FDPS-219ENST00000495308 RUNDC3BQ96NL0 473 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 SERPINB12Q96P63 405 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 C19orf43Q9BQ61 176 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 DPEP2Q9H4A9 486 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 RMI1Q9H9A7 625 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 SPATS2LQ9NUQ6 558 aaKnown RBP13.42□□□□□ -0.26
FDPS-219ENST00000495308 SMOXQ9NWM0 555 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 BFARQ9NZS9 450 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 TAAR2Q9P1P5 351 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 GULP1Q9UBP9 304 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 KCNK6Q9Y257 313 aa13.42□□□□□ -0.26
FDPS-219ENST00000495308 COL27A1Q8IZC6 1860 aaPredicted RBP13.42□□□□□ -0.26
FDPS-219ENST00000495308 AGAP14A8MT82 685 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 CHUKO15111 745 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 URI1O94763 535 aaPredicted RBP13.41□□□□□ -0.26
FDPS-219ENST00000495308 CKMT1AP12532 417 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 SARNPP82979 210 aaKnown RBP13.41□□□□□ -0.26
FDPS-219ENST00000495308 FOXC1Q12948 553 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 NR0B2Q15466 257 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 PCID2Q5JVF3 399 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 RNASEH2BQ5TBB1 312 aaKnown RBP13.41□□□□□ -0.26
FDPS-219ENST00000495308 IZUMO3Q5VZ72 239 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 GUSBP11Q6P575 273 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 LVRNQ6Q4G3 990 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 CES3Q6UWW8 571 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 DET1Q7L5Y6 550 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 ERMP1Q7Z2K6 904 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 LRRTM4Q86VH4 590 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 TRAPPC5Q8IUR0 188 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 ZNF547Q8IVP9 402 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 PPIL6Q8IXY8 311 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 PIANPQ8IYJ0 282 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 NXPE1Q8N323 547 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 MPP5Q8N3R9 675 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 SDR16C5Q8N3Y7 309 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 ARL10Q8N8L6 244 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 RASGEF1AQ8N9B8 481 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 ZDHHC1Q8WTX9 485 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 HDAC10Q969S8 669 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 TTC25Q96NG3 672 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 TRIM56Q9BRZ2 755 aaKnown RBP13.41□□□□□ -0.26
FDPS-219ENST00000495308 ZCCHC2Q9C0B9 1178 aaKnown RBP13.41□□□□□ -0.26
FDPS-219ENST00000495308 IL22Q9GZX6 179 aa13.41□□□□□ -0.26
FDPS-219ENST00000495308 APOBEC2Q9Y235 224 aaKnown RBP13.41□□□□□ -0.26
FDPS-219ENST00000495308 TRBV5-4A0A0C4DH59 114 aa13.4□□□□□ -0.26
FDPS-219ENST00000495308 CPED1A4D0V7 1026 aa13.4□□□□□ -0.26
FDPS-219ENST00000495308 OR2AG2A6NM03 316 aa13.4□□□□□ -0.26
FDPS-219ENST00000495308 GPR89AB7ZAQ6 455 aa13.4□□□□□ -0.26
FDPS-219ENST00000495308 AP3B1O00203 1094 aa13.4□□□□□ -0.26
FDPS-219ENST00000495308 KMOO15229 486 aa13.4□□□□□ -0.26
FDPS-219ENST00000495308 RFPL3O75679 317 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms