RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 MMP12P39900 470 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 SLCO1A2P46721 670 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 ARCN1P48444 511 aaKnown RBP13.18□□□□□ -0.3
BRAT1-205ENST00000473879 TMPRSS15P98073 1019 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 CDKN3Q16667 212 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 SEL1L3Q68CR1 1132 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 MRNIPQ6NTE8 343 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 NEPROQ6NW34 567 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 ADGRD1Q6QNK2 874 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 KIAA0408Q6ZU52 694 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 RAVER1Q8IY67 606 aaKnown RBP13.18□□□□□ -0.3
BRAT1-205ENST00000473879 UNC5BQ8IZJ1 945 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 OTUD6BQ8N6M0 293 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 FAM174AQ8TBP5 190 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 SCG3Q8WXD2 468 aaKnown RBP13.18□□□□□ -0.3
BRAT1-205ENST00000473879 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.18□□□□□ -0.3
BRAT1-205ENST00000473879 PGM2Q96G03 612 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 CDKN2AIPNLQ96HQ2 116 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 SGSM3Q96HU1 749 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 CAMK1GQ96NX5 476 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 DHRS4Q9BTZ2 278 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 CENPHQ9H3R5 247 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 TMBIM4Q9HC24 238 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 GPR27Q9NS67 375 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 IARS2Q9NSE4 1012 aaKnown RBP13.18□□□□□ -0.3
BRAT1-205ENST00000473879 APPL1Q9UKG1 709 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 PCOLCE2Q9UKZ9 415 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 KCTD3Q9Y597 815 aa13.18□□□□□ -0.3
BRAT1-205ENST00000473879 TRPM6Q9BX84 2022 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 SPEGQ15772 3267 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 CCDC162PA2VCL2 907 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 CXorf49A8MYA2 514 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 PFDN6O15212 129 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 SLC31A1O15431 190 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 YKT6O15498 198 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 KRT37O76014 449 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 KRT38O76015 456 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 GOT2P00505 430 aaKnown RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 ELFN1P0C7U0 828 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 OGNP20774 298 aaKnown RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 LHCGRP22888 699 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 ARNTP27540 789 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 GCAP28676 217 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 SPAM1P38567 509 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 GP5P40197 560 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 RXRGP48443 463 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 ARSDP51689 593 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 STC1P52823 247 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 CSE1LP55060 971 aaKnown RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 SHC2P98077 582 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 AGERQ15109 404 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 PTPRRQ15256 657 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 TMED2Q15363 201 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 TRIP6Q15654 476 aaKnown RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 FASTKD1Q53R41 847 aaKnown RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 LRRC73Q5JTD7 316 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 AARS2Q5JTZ9 985 aaKnown RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 AGBL2Q5U5Z8 902 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 ZNF470Q6ECI4 717 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 GLRX5Q86SX6 157 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 TSPAN33Q86UF1 283 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 CBARPQ8N350 705 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 OXR1Q8N573 874 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 OR4L1Q8NH43 312 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 SETD7Q8WTS6 366 aaKnown RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 DCAKDQ8WVC6 231 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 ASB12Q8WXK4 309 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 KLK6Q92876 244 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 MRRFQ96E11 262 aaKnown RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 KLHDC7BQ96G42 594 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 TBATAQ96M53 351 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 LENG8Q96PV6 779 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-205ENST00000473879 C1QTNF2Q9BXJ5 285 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 SLC17A9Q9BYT1 436 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 CDH19Q9H159 772 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 SMYD2Q9NRG4 433 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 CATSPERZQ9NTU4 200 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 IL1RAPL1Q9NZN1 696 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 FKBPLQ9UIM3 349 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 GGT7Q9UJ14 662 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 HS3ST3A1Q9Y663 406 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 SLC30A1Q9Y6M5 507 aa13.17□□□□□ -0.3
BRAT1-205ENST00000473879 KNL1Q8NG31 2342 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 SPAARA0A1B0GVQ0 90 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 RGSL1A5PLK6 1076 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 A8MX80 341 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 HMGB1P1B2RPK0 211 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-205ENST00000473879 CCL22O00626 93 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 NEMP1O14524 444 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 PAK4O96013 591 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-205ENST00000473879 C1SP09871 688 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 GM2AP17900 193 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 ITGALP20701 1170 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 MC4RP32245 332 aa13.16□□□□□ -0.3
BRAT1-205ENST00000473879 SPRP35270 261 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-205ENST00000473879 ARRB1P49407 418 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-205ENST00000473879 SIM1P81133 766 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-205ENST00000473879 RALGDSQ12967 914 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms