RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SLC2A13Q96QE2 648 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 IL22Q9GZX6 179 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 ILKAPQ9H0C8 392 aaPredicted RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 COPS7BQ9H9Q2 264 aaPredicted RBP12.27□□□□□ -0.45
USP11-206ENST00000469080 ZDHHC4Q9NPG8 344 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 RGS18Q9NS28 235 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 PCDHB9Q9Y5E1 797 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 SLC30A1Q9Y6M5 507 aa12.27□□□□□ -0.45
USP11-206ENST00000469080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.26□□□□□ -0.45
USP11-206ENST00000469080 STX16-NPEPL1H3BU86 382 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 RPL10P27635 214 aaKnown RBP12.26□□□□□ -0.45
USP11-206ENST00000469080 SERPINB1P30740 379 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 SERPINH1P50454 418 aaKnown RBP12.26□□□□□ -0.45
USP11-206ENST00000469080 RENBPP51606 427 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 CYP4F8P98187 520 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 CREB5Q02930 508 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 ZNF177Q13360 481 aaPredicted RBP12.26□□□□□ -0.45
USP11-206ENST00000469080 TAZQ16635 292 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 SPANXN3Q5MJ09 141 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 SNAP47Q5SQN1 464 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 ATAD3BQ5T9A4 648 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 PQLC1Q8N2U9 271 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 LRRC39Q96DD0 335 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 TNKS2Q9H2K2 1166 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 SOX13Q9UN79 622 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 MYRFQ9Y2G1 1151 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 ENPP3O14638 875 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 ASNA1O43681 348 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 SGTAO43765 313 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 NDUFS3O75489 264 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 ALX3O95076 343 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 KRT6AP02538 564 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 KRT6BP04259 564 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 SERPINE1P05121 402 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 KRT8P05787 483 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 ATP5C1P36542 298 aaKnown RBP12.26□□□□□ -0.45
USP11-206ENST00000469080 CDKL1Q00532 357 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 GNA13Q14344 377 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 FAM83EQ2M2I3 478 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 MS4A13Q5J8X5 152 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 PITRM1Q5JRX3 1037 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 SDE2Q6IQ49 451 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 HPS6Q86YV9 775 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 KCTD13Q8WZ19 329 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 RMND5BQ96G75 393 aaPredicted RBP12.26□□□□□ -0.45
USP11-206ENST00000469080 RBBP8Q99708 897 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 TTPALQ9BTX7 342 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 FRMD8Q9BZ67 464 aaPredicted RBP12.26□□□□□ -0.45
USP11-206ENST00000469080 FBXO44Q9H4M3 255 aa12.26□□□□□ -0.45
USP11-206ENST00000469080 FCF1Q9Y324 198 aaKnown RBP12.26□□□□□ -0.45
USP11-206ENST00000469080 ARHGEF37A1IGU5 675 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 C2orf78A6NCI8 922 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 NBNO60934 754 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 DLDP09622 509 aaKnown RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 TFEBP19484 476 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 PRKCHP24723 683 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 CORO1AP31146 461 aaKnown RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 ECT2LQ008S8 904 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 GRTP1Q5TC63 336 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 RNF219Q5W0B1 726 aaPredicted RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 CYP20A1Q6UW02 462 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 CYP2R1Q6VVX0 501 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 OR4K2Q8NGD2 314 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 GPR63Q9BZJ6 419 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 MOV10Q9HCE1 1003 aaKnown RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 SEMA4BQ9NPR2 832 aaPredicted RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 POLE4Q9NR33 117 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 ANKMY1Q9P2S6 941 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 KLQ9UEF7 1012 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 ARHGAP26Q9UNA1 814 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 PTGDR2Q9Y5Y4 395 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 SF3B1O75533 1304 aaKnown RBP eCLIP12.25□□□□□ -0.454e-7■■■■■ 86.2
USP11-206ENST00000469080 HOXC11O43248 304 aaPredicted RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 TRIM16O95361 564 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 SELPP16109 830 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 CRHR1P34998 444 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 GLUD2P49448 558 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 RPL26P61254 145 aaKnown RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 ATG14Q6ZNE5 492 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 TMEM26Q6ZUK4 368 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 CXorf21Q9HAI6 301 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 TCF7L2Q9NQB0 619 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 TRPM5Q9NZQ8 1165 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 TRHDEQ9UKU6 1024 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 ZNF839A8K0R7 811 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 HDAC3O15379 428 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 NCAM2O15394 837 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 MLLT6P55198 1093 aaPredicted RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 RACK1P63244 317 aaKnown RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 PCLAFQ15004 111 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 PAFAH1B3Q15102 231 aaKnown RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 FUT11Q495W5 492 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 PCID2Q5JVF3 399 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 CATSPER1Q8NEC5 780 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 MAPK15Q8TD08 544 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 HEXDCQ8WVB3 486 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 ZNF419Q96HQ0 510 aaPredicted RBP12.25□□□□□ -0.45
USP11-206ENST00000469080 VPS45Q9NRW7 570 aa12.25□□□□□ -0.45
USP11-206ENST00000469080 MARCH4Q9P2E8 410 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms