RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TMEM221A6NGB7 291 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 PSMD12O00232 456 aaPredicted RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 HNRNPRO43390 633 aaKnown RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 TGM5O43548 720 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 CKMP06732 381 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 CNPP09543 421 aaKnown RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 PKMP14618 531 aaKnown RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 MRPS22P82650 360 aaKnown RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 RALGDSQ12967 914 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 ART3Q13508 389 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 SFT2D3Q587I9 215 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 REP15Q6BDI9 236 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 LAYNQ6UX15 382 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 FAM151BQ6UXP7 276 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 TAS2R42Q7RTR8 314 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 DDX53Q86TM3 631 aaKnown RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 ZSWIM9Q86XI8 627 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 LINGO1Q96FE5 620 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 MYO19Q96H55 970 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 FAR2Q96K12 515 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 TOX2Q96NM4 488 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 ECSITQ9BQ95 431 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 TRMOQ9BU70 441 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 BOCQ9BWV1 1114 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 CACNA2D2Q9NY47 1150 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 UTP6Q9NYH9 597 aaKnown RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 IL17CQ9P0M4 197 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 CFAP97Q9P2B7 532 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 PRPF19Q9UMS4 504 aaKnown RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 TIMM22Q9Y584 194 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 MYO7AQ13402 2215 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 GOLGA8CPA6NN73 597 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 GAPDHSO14556 408 aaPredicted RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 E2F6O75461 281 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 ADSLP30566 484 aaPredicted RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 CD70P32970 193 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 RAD51Q06609 339 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 SQLEQ14534 574 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 C18orf21Q32NC0 220 aaPredicted RBP15.06■□□□□ 0
SCAMP4-202ENST00000409472 PHYKPLQ8IUZ5 450 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 FUNDC1Q8IVP5 155 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 FBXO39Q8N4B4 442 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 RIN3Q8TB24 985 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 LKAAEAR1Q8TD35 194 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 DDI1Q8WTU0 396 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 PIH1D2Q8WWB5 315 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 JADE3Q92613 823 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 KLHL32Q96NJ5 620 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 ZNF225Q9UK10 706 aa15.06■□□□□ 0
SCAMP4-202ENST00000409472 A0A1W2PRU2 124 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 E7ENX8 843 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 LINC00032P0C843 101 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 HOXB8P17481 243 aaPredicted RBP15.05■□□□□ 0
SCAMP4-202ENST00000409472 CTSOP43234 321 aaPredicted RBP15.05■□□□□ 0
SCAMP4-202ENST00000409472 STK19P49842 368 aaPredicted RBP15.05■□□□□ 0
SCAMP4-202ENST00000409472 YBX1P67809 324 aaKnown RBP15.05■□□□□ 0
SCAMP4-202ENST00000409472 CBX3Q13185 183 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 FLOT2Q14254 428 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 LRRC26Q2I0M4 334 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 TMEM259Q4ZIN3 620 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 KANK2Q63ZY3 851 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 TMC8Q8IU68 726 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 DCAF4L2Q8NA75 395 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 SMYD1Q8NB12 490 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 BHLHE22Q8NFJ8 381 aaPredicted RBP15.05■□□□□ 0
SCAMP4-202ENST00000409472 VOPP1Q96AW1 172 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 LRCH3Q96II8 777 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 RPL10LQ96L21 214 aaKnown RBP15.05■□□□□ 0
SCAMP4-202ENST00000409472 EBF3Q9H4W6 596 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 EFCAB1Q9HAE3 211 aa15.05■□□□□ 0
SCAMP4-202ENST00000409472 MRPL17Q9NRX2 175 aaKnown RBP15.05■□□□□ 0
SCAMP4-202ENST00000409472 INTS6Q9UL03 887 aaKnown RBP15.05■□□□□ 0
SCAMP4-202ENST00000409472 TRIM43BA6NCK2 446 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 AZIN1O14977 448 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 LILRB3O75022 631 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 ZNF821O75541 412 aaPredicted RBP15.05■□□□□ -0
SCAMP4-202ENST00000409472 PARNO95453 639 aaKnown RBP15.05■□□□□ -0
SCAMP4-202ENST00000409472 UBTFL6P0CB48 400 aaPredicted RBP15.05■□□□□ -0
SCAMP4-202ENST00000409472 ITGB6P18564 788 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 AQP4P55087 323 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 CLCQ05315 142 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 LMAN2Q12907 356 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 LRP8Q14114 963 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 INO80DQ53TQ3 878 aaPredicted RBP15.05■□□□□ -0
SCAMP4-202ENST00000409472 SCIMPQ6UWF3 145 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 RETREG3Q86VR2 466 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 DDIASQ8IXT1 998 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 CLYBLQ8N0X4 340 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 AFAP1L2Q8N4X5 818 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 STAG3L4Q8TBR4 150 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 TRIM43Q96BQ3 446 aaPredicted RBP15.05■□□□□ -0
SCAMP4-202ENST00000409472 DDX50Q9BQ39 737 aaKnown RBP15.05■□□□□ -0
SCAMP4-202ENST00000409472 LRRC3Q9BY71 257 aa15.05■□□□□ -0
SCAMP4-202ENST00000409472 GPC4O75487 556 aa15.04■□□□□ -0
SCAMP4-202ENST00000409472 PGLSO95336 258 aa15.04■□□□□ -0
SCAMP4-202ENST00000409472 HNRNPCP07910 306 aaKnown RBP eCLIP15.04■□□□□ -0
SCAMP4-202ENST00000409472 RPS17P08708 135 aaKnown RBP15.04■□□□□ -0
SCAMP4-202ENST00000409472 CLTBP09497 229 aa15.04■□□□□ -0
SCAMP4-202ENST00000409472 LAG3P18627 525 aa15.04■□□□□ -0
SCAMP4-202ENST00000409472 CHRM3P20309 590 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms