RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CDH19Q9H159 772 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 VCX3BQ9H321 246 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 C8orf33Q9H7E9 229 aaPredicted RBP11.98□□□□□ -0.49
USF1-203ENST00000368021 POPDC3Q9HBV1 291 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 VCX3AQ9NNX9 186 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 PCDH12Q9NPG4 1184 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 RAPGEFL1Q9UHV5 662 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 SARDHQ9UL12 918 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 EMCNQ9ULC0 261 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 COMMD10Q9Y6G5 202 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 COL4A2P08572 1712 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 CKAP5Q14008 2032 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 ATG2BQ96BY7 2078 aa11.98□□□□□ -0.49
USF1-203ENST00000368021 RGSL1A5PLK6 1076 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 TCP11X1B4DZS4 312 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 KPNA3O00505 521 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 KLF11O14901 512 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 PHGDHO43175 533 aaKnown RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 WFS1O76024 890 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 WISP3O95389 354 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 PROCP04070 461 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 APOA4P06727 396 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 EPHX1P07099 455 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 PRSS56P0CW18 603 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 SAT1P21673 171 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 FDXRP22570 491 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 XPAP23025 273 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 ALDH3A1P30838 453 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 MMP12P39900 470 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 SPINT3P49223 89 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 CDKN1CP49918 316 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 DCDC1P59894 354 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 TSNAXIP1Q2TAA8 658 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 LYPLAL1Q5VWZ2 237 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 ERAP2Q6P179 960 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 ZNF549Q6P9A3 640 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 FAM151BQ6UXP7 276 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 PARS2Q7L3T8 475 aaKnown RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 TRIM42Q8IWZ5 723 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 CENPLQ8N0S6 344 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 PLD6Q8N2A8 252 aaKnown RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 PNPLA1Q8N8W4 532 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 RAB3IL1Q8TBN0 382 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 LRRC8CQ8TDW0 803 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 OLFM1Q99784 485 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 AARSD1Q9BTE6 412 aaKnown RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 CCDC68Q9H2F9 335 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 PRSS16Q9NQE7 514 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 RAD18Q9NS91 495 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 CACNA2D2Q9NY47 1150 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 PKD2L2Q9NZM6 624 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 NFKBIL1Q9UBC1 381 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 WDR37Q9Y2I8 494 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 MRPS17Q9Y2R5 130 aaKnown RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 EME2A4GXA9 379 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 A8MX80 341 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 C1QTNF3-AMACRE9PGA6 284 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 H0Y858 1186 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 K7EQS6 105 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 PSMD11O00231 422 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 SMIM24O75264 130 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 KLHL2O95198 593 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 ESR1P03372 595 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 C1SP09871 688 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 DRD4P21917 467 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 KIR2DL1P43626 348 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 KPNA2P52292 529 aaKnown RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 CDKN2DP55273 166 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 IRF9Q00978 393 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 TAS2R42Q7RTR8 314 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 TBC1D1Q86TI0 1168 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 GPR26Q8NDV2 337 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 C17orf50Q8WW18 174 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 ZNF75CPQ92670 426 aaPredicted RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 UBXN10Q96LJ8 280 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 BIRC8Q96P09 236 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 TRIM4Q9C037 500 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 NSRP1Q9H0G5 558 aaKnown RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 ASB8Q9H765 288 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 LMAN1LQ9HAT1 526 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 NMRAL1Q9HBL8 299 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 GPAMQ9HCL2 828 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 TMEM216Q9P0N5 145 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 SIRPGQ9P1W8 387 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 FNDC3AQ9Y2H6 1198 aaKnown RBP11.97□□□□□ -0.49
USF1-203ENST00000368021 STON1Q9Y6Q2 735 aa11.97□□□□□ -0.49
USF1-203ENST00000368021 UBA6A0AVT1 1052 aaPredicted RBP11.96□□□□□ -0.49
USF1-203ENST00000368021 ANTXRLA6NF34 631 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 BPGMP07738 259 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 RPS3P23396 243 aaKnown RBP eCLIP11.96□□□□□ -0.49
USF1-203ENST00000368021 ELP6Q0PNE2 266 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 RALGDSQ12967 914 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 FZD5Q13467 585 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 CAMK2GQ13555 558 aaPredicted RBP11.96□□□□□ -0.49
USF1-203ENST00000368021 ITGA9Q13797 1035 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 ZNF460Q14592 562 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 FAM83EQ2M2I3 478 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 LRRC73Q5JTD7 316 aa11.96□□□□□ -0.49
USF1-203ENST00000368021 GKAP1Q5VSY0 366 aaPredicted RBP11.96□□□□□ -0.49
USF1-203ENST00000368021 FAM46CQ5VWP2 391 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms