RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 A0A0U1RQS6 177 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 DIAPH2O60879 1101 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 ATP6V1G2O95670 118 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 TRBC1P01850 177 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 ALPIP09923 528 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 CD1DP15813 335 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 SERPINB5P36952 375 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 KIR2DL1P43626 348 aaPredicted RBP22.45■■□□□ 1.18
CDX1-201ENST00000231656 RPL14P50914 215 aaKnown RBP22.45■■□□□ 1.18
CDX1-201ENST00000231656 PSAPL1Q6NUJ1 521 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 RINLQ6ZS11 566 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 TRIM67Q6ZTA4 783 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 LONP2Q86WA8 852 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 STK40Q8N2I9 435 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 ZNF513Q8N8E2 541 aaPredicted RBP22.45■■□□□ 1.18
CDX1-201ENST00000231656 EID2BQ96D98 161 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 ZDHHC2Q9UIJ5 367 aa22.45■■□□□ 1.18
CDX1-201ENST00000231656 UBA6A0AVT1 1052 aaPredicted RBP22.44■■□□□ 1.18
CDX1-201ENST00000231656 A8MUI8 341 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 PRR5-ARHGAP8B1AHC4 643 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 NDUFS3O75489 264 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 SRFP11831 508 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 ZNF37AP17032 561 aaPredicted RBP22.44■■□□□ 1.18
CDX1-201ENST00000231656 AOC1P19801 751 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 ARHGAP8P85298 464 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 XIAPP98170 497 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 ENPP2Q13822 863 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 SLC9B1Q4ZJI4 515 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 SETMARQ53H47 684 aaPredicted RBP22.44■■□□□ 1.18
CDX1-201ENST00000231656 TMEM196Q5HYL7 178 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 CFAP157Q5JU67 520 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 LYSMD3Q7Z3D4 306 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 CCNYL1Q8N7R7 359 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 AGR3Q8TD06 166 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 PTERQ96BW5 349 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 OSBPL1AQ9BXW6 950 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 ALG9Q9H6U8 611 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 SLC2A4RGQ9NR83 387 aa22.44■■□□□ 1.18
CDX1-201ENST00000231656 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.44■■□□□ 1.18
CDX1-201ENST00000231656 A0A1W2PQ67 120 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 GRID2O43424 1007 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 IPO13O94829 963 aaKnown RBP22.43■■□□□ 1.18
CDX1-201ENST00000231656 SNUPNO95149 360 aaKnown RBP22.43■■□□□ 1.18
CDX1-201ENST00000231656 ENO1P06733 434 aaKnown RBP22.43■■□□□ 1.18
CDX1-201ENST00000231656 EPHX1P07099 455 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 FMO4P31512 558 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 KCNC1P48547 511 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 SEC13P55735 322 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 SNCBQ16143 134 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 CHPFQ8IZ52 775 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 STON2Q8WXE9 905 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 CNDP1Q96KN2 507 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 NCKIPSDQ9NZQ3 722 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 SUN2Q9UH99 717 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 TAGLN3Q9UI15 199 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 VPS9D1Q9Y2B5 631 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 PPIL1Q9Y3C6 166 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 STON1Q9Y6Q2 735 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 CKAP5Q14008 2032 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 NPC1O15118 1278 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 HDAC3O15379 428 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 ZBTB14O43829 449 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 EGFP01133 1207 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 GLULP15104 373 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 TIE1P35590 1138 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 TTPAP49638 278 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 ELAVL3Q14576 367 aaKnown RBP22.43■■□□□ 1.18
CDX1-201ENST00000231656 BRAT1Q6PJG6 821 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 OR8D1Q8WZ84 308 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 BIRC8Q96P09 236 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 CADM1Q9BY67 442 aaKnown RBP22.43■■□□□ 1.18
CDX1-201ENST00000231656 GPR63Q9BZJ6 419 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 CYP4F12Q9HCS2 524 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 TAS2R1Q9NYW7 299 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 SARDHQ9UL12 918 aa22.43■■□□□ 1.18
CDX1-201ENST00000231656 SRP72O76094 671 aaKnown RBP22.42■■□□□ 1.18
CDX1-201ENST00000231656 RHOBTB1O94844 696 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 CHRM1P11229 460 aaPredicted RBP22.42■■□□□ 1.18
CDX1-201ENST00000231656 HNF1BP35680 557 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 HMGCLP35914 325 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 PDAP1Q13442 181 aaKnown RBP22.42■■□□□ 1.18
CDX1-201ENST00000231656 E2F5Q15329 346 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 ZNF805Q5CZA5 627 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 SLC22A9Q8IVM8 553 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 SCRN2Q96FV2 425 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 FAM129BQ96TA1 746 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 PRSS16Q9NQE7 514 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 VTI1BQ9UEU0 232 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 PKP3Q9Y446 797 aa22.42■■□□□ 1.18
CDX1-201ENST00000231656 TSPAN11A1L157 253 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 CAPN8A6NHC0 703 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 F8W8V4 182 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 SLCO1B7G3V0H7 640 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 PRNPP04156 253 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 DRD1P21728 446 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 WASP42768 502 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 POLR2LP62875 67 aaKnown RBP22.41■■□□□ 1.18
CDX1-201ENST00000231656 GRSF1Q12849 480 aaKnown RBP eCLIP22.41■■□□□ 1.18
CDX1-201ENST00000231656 CDKN3Q16667 212 aa22.41■■□□□ 1.18
CDX1-201ENST00000231656 ZRANB3Q5FWF4 1079 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms