RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 OTUB2Q96DC9 234 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 UBXN10Q96LJ8 280 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 AARSD1Q9BTE6 412 aaKnown RBP18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 CDC7O00311 574 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 BIRC5O15392 142 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 ETV3P41162 512 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 ADAM15Q13444 863 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 CCDC85BQ15834 202 aaPredicted RBP18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 DBN1Q16643 649 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 CTC1Q2NKJ3 1217 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 TYSND1Q2T9J0 566 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 ATP13A5Q4VNC0 1218 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 WASHC2DQ5SRD0 308 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 ATG16L1Q676U5 607 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 MAVSQ7Z434 540 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 HSD11B1LQ7Z5J1 315 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 ISCA2Q86U28 154 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 ENDOVQ8N8Q3 282 aaKnown RBP18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 EEF1AKMT1Q8WVE0 214 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 ECHDC3Q96DC8 303 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 ANKRD27Q96NW4 1050 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 HEPHQ9BQS7 1158 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 TNFRSF12AQ9NP84 129 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 OXSMQ9NWU1 459 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 LRRC42Q9Y546 428 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 SIX3O95343 332 aaPredicted RBP18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 TRIM16O95361 564 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 LTA4HP09960 611 aaKnown RBP18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 LAMP2P13473 410 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 FDXRP22570 491 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 MPSTP25325 297 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 OPRD1P41143 372 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 ARFIP2P53365 341 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 RUNX3Q13761 415 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 SLC14A2Q15849 920 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 IER5LQ5T953 404 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 CPNE9Q8IYJ1 553 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 PBXIP1Q96AQ6 731 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 S1PR5Q9H228 398 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 PCDH12Q9NPG4 1184 aa18.08■□□□□ 0.49
SNAPC3-207ENST00000610884 GLYATL1P3A0A0U1RQE8 302 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 TRIM13O60858 407 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 SOCS5O75159 536 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 NFATC1O95644 943 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 JUNP05412 331 aaKnown RBP18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 ATP5BP06576 529 aaKnown RBP18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 CDH13P55290 713 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 NFATC2Q13469 925 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 ZNF234Q14588 700 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 PELI3Q8N2H9 469 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 ISG20Q96AZ6 181 aaKnown RBP18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 CCDC68Q9H2F9 335 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 TTYH1Q9H313 450 aaPredicted RBP18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 THAP1Q9NVV9 213 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 GDE1Q9NZC3 331 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 LNPEPQ9UIQ6 1025 aa18.08■□□□□ 0.48
SNAPC3-207ENST00000610884 VPS13AQ96RL7 3174 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 UBXN8O00124 270 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 SERPINE1P05121 402 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 C1SP09871 688 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 ZNF37AP17032 561 aaPredicted RBP18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 ABCE1P61221 599 aaKnown RBP18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 SULT2A1Q06520 285 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 FAM83EQ2M2I3 478 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 ARL13AQ5H913 290 aaPredicted RBP18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 ANO7Q6IWH7 933 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 CES5AQ6NT32 575 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 SERPINA13PQ6UXR4 307 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 CRLF3Q8IUI8 442 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 YIPF3Q9GZM5 350 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 IL36AQ9UHA7 158 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 G3BP2Q9UN86 482 aaKnown RBP18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 PIKFYVEQ9Y2I7 2098 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 GOLGA8QA0A0J9YX86 632 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 GOLGA8OA6NCC3 632 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 KRT87PA6NCN2 255 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 GOLGA8NF8WBI6 632 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 HOXC11O43248 304 aaPredicted RBP18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 HSPA4LO95757 839 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 IL1BP01584 269 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 CD1EP15812 388 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 TIMP2P16035 220 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 ATP6V1C1P21283 382 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 CSNK1DP48730 415 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 PFKPQ01813 784 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 RAD51Q06609 339 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 LAMB3Q13751 1172 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 TECRLQ5HYJ1 363 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 FAM45BPQ6NSW5 357 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 TPRG1Q6ZUI0 275 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 MMAAQ8IVH4 418 aaKnown RBP18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 YAF2Q8IY57 180 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 FAM45AQ8TCE6 357 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 MAPK15Q8TD08 544 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 ZNF398Q8TD17 642 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 PPP4R1Q8TF05 950 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 PPP2R3CQ969Q6 453 aa18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 CADM1Q9BY67 442 aaKnown RBP18.07■□□□□ 0.48
SNAPC3-207ENST00000610884 LMAN2LQ9H0V9 348 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms