RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 LRRK1Q38SD2 2015 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 ZFYVE26Q68DK2 2539 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 MIF4GDA9UHW6 222 aaKnown RBP10.41□□□□□ -0.74
CCDC9-203ENST00000596938 CHUKO15111 745 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 GRID2O43424 1007 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 VEGFDO43915 354 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 PPFIA2O75334 1257 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 ANXA9O76027 345 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 TNFSF15O95150 251 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 CPNE6O95741 557 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 PYGMP11217 842 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 ZNF8P17098 575 aaPredicted RBP10.41□□□□□ -0.74
CCDC9-203ENST00000596938 HLA-DPA1P20036 260 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 CD1CP29017 333 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 ALDH4A1P30038 563 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 FASLGP48023 281 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 OR1D5P58170 312 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 EIF3EP60228 445 aaKnown RBP10.41□□□□□ -0.74
CCDC9-203ENST00000596938 OTUD4Q01804 1114 aaKnown RBP10.41□□□□□ -0.74
CCDC9-203ENST00000596938 TLE3Q04726 772 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 SLC1A5Q15758 541 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 ZNF569Q5MCW4 686 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 ITPRIPL1Q6GPH6 555 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 IYDQ6PHW0 289 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 RANBP10Q6VN20 620 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 CHST15Q7LFX5 561 aaPredicted RBP10.41□□□□□ -0.74
CCDC9-203ENST00000596938 PEX26Q7Z412 305 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 SLITRK4Q8IW52 837 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 SPACA3Q8IXA5 215 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 SFRP1Q8N474 314 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 FBXO39Q8N4B4 442 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 TTC30BQ8N4P2 665 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 ACTL9Q8TC94 416 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 PATE1Q8WXA2 126 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 CCDC97Q96F63 343 aaPredicted RBP10.41□□□□□ -0.74
CCDC9-203ENST00000596938 VPS35Q96QK1 796 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 DPYSL5Q9BPU6 564 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 FOXP3Q9BZS1 431 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 OR2AG1Q9H205 316 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 PRORYQ9H606 182 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 EPB41L5Q9HCM4 733 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 IL26Q9NPH9 171 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 RSPH14Q9UHP6 348 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 AMFRQ9UKV5 643 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 ATXN7L1Q9ULK2 861 aaPredicted RBP10.41□□□□□ -0.74
CCDC9-203ENST00000596938 SSUH2Q9Y2M2 353 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 AAR2Q9Y312 384 aaKnown RBP10.41□□□□□ -0.74
CCDC9-203ENST00000596938 PRKAB1Q9Y478 270 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 PCDHGA7Q9Y5G6 932 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 PCYT1BQ9Y5K3 369 aaPredicted RBP10.41□□□□□ -0.74
CCDC9-203ENST00000596938 ASXL3Q9C0F0 2248 aa10.41□□□□□ -0.74
CCDC9-203ENST00000596938 A6NCN8 305 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 OR5K4A6NMS3 321 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 RBP3P10745 1247 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 UGT1A5P35504 534 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 CHRNA4P43681 627 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 GEMP55040 296 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 CCDC173Q0VFZ6 552 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 BIRC2Q13490 618 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 AMZ1Q400G9 498 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 ANKRD20A2Q5SQ80 823 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.4□□□□□ -0.74
CCDC9-203ENST00000596938 ANKRD20A1Q5TYW2 823 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 ANKRD20A3Q5VUR7 823 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 ALS2CLQ60I27 953 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 DARS2Q6PI48 645 aaKnown RBP10.4□□□□□ -0.74
CCDC9-203ENST00000596938 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 ZNF574Q6ZN55 896 aaPredicted RBP10.4□□□□□ -0.74
CCDC9-203ENST00000596938 USP53Q70EK8 1073 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 TMPRSS9Q7Z410 1059 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 ADGRG6Q86SQ4 1221 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 PHYKPLQ8IUZ5 450 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 CDKL3Q8IVW4 592 aaPredicted RBP10.4□□□□□ -0.74
CCDC9-203ENST00000596938 SLC25A41Q8N5S1 370 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 RNF10Q8N5U6 811 aaKnown RBP10.4□□□□□ -0.74
CCDC9-203ENST00000596938 UBL4BQ8N7F7 174 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 TTC13Q8NBP0 860 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 IPMKQ8NFU5 416 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 BRSK1Q8TDC3 778 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 SH3KBP1Q96B97 665 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 PPP1R2P1Q96PQ5 205 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 CMKLR1Q99788 373 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 B3GNT4Q9C0J1 378 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 GBA3Q9H227 469 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 C10orf88Q9H8K7 445 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 SARS2Q9NP81 518 aaKnown RBP10.4□□□□□ -0.74
CCDC9-203ENST00000596938 IL17CQ9P0M4 197 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 TBC1D29Q9UFV1 150 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 ACSL6Q9UKU0 697 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 FAM208BQ5VWN6 2430 aa10.4□□□□□ -0.74
CCDC9-203ENST00000596938 TRBV23OR9-2A0A075B6M9 112 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 IGHV1OR21-1A0A087WYE8 117 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 KIR2DS5A0A0G2JLQ3 304 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 A0A0G2JNG1 304 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 MACROD2A1Z1Q3 448 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 PMS2P1A4D2B8 440 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 C5orf60A6NFR6 353 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 KIR2DS3K7RE56 304 aa10.39□□□□□ -0.75
CCDC9-203ENST00000596938 HGSO14964 777 aaPredicted RBP10.39□□□□□ -0.75
CCDC9-203ENST00000596938 KMOO15229 486 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms