RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 RAPGEF5Q92565 580 aa21.54■■□□□ 1.04
DDX39A-215ENST00000590696 SH3KBP1Q96B97 665 aa21.54■■□□□ 1.04
DDX39A-215ENST00000590696 ZNF830Q96NB3 372 aaPredicted RBP21.54■■□□□ 1.04
DDX39A-215ENST00000590696 ADGRE3Q9BY15 652 aa21.54■■□□□ 1.04
DDX39A-215ENST00000590696 LCMT1Q9UIC8 334 aa21.54■■□□□ 1.04
DDX39A-215ENST00000590696 NUAK1O60285 661 aa21.53■■□□□ 1.04
DDX39A-215ENST00000590696 PPIDQ08752 370 aaKnown RBP21.53■■□□□ 1.04
DDX39A-215ENST00000590696 ZBTB17Q13105 803 aa21.53■■□□□ 1.04
DDX39A-215ENST00000590696 GALNT3Q14435 633 aa21.53■■□□□ 1.04
DDX39A-215ENST00000590696 FAM182AQ5T1J6 154 aa21.53■■□□□ 1.04
DDX39A-215ENST00000590696 HERPUD2Q9BSE4 406 aa21.53■■□□□ 1.04
DDX39A-215ENST00000590696 TRIM4Q9C037 500 aa21.53■■□□□ 1.04
DDX39A-215ENST00000590696 CARD9Q9H257 536 aa21.53■■□□□ 1.04
DDX39A-215ENST00000590696 ARFGAP3Q9NP61 516 aa21.53■■□□□ 1.04
DDX39A-215ENST00000590696 ATXN10Q9UBB4 475 aa21.53■■□□□ 1.04
DDX39A-215ENST00000590696 A6NCN8 305 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 GRID2O43424 1007 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 F3P13726 295 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 SLC2A4P14672 509 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 HNRNPH3P31942 346 aaKnown RBP21.52■■□□□ 1.04
DDX39A-215ENST00000590696 MAPK9P45984 424 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 IFI35P80217 286 aaPredicted RBP21.52■■□□□ 1.04
DDX39A-215ENST00000590696 MC2RQ01718 297 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 MESDQ14696 234 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 SLC18A3Q16572 532 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 KDELC2Q7Z4H8 507 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 PLD5Q8N7P1 536 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 EID2BQ96D98 161 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 RTP4Q96DX8 246 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 TEFMQ96QE5 360 aaKnown RBP21.52■■□□□ 1.04
DDX39A-215ENST00000590696 CTRCQ99895 268 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 SPATA16Q9BXB7 569 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.52■■□□□ 1.04
DDX39A-215ENST00000590696 ZFYVE1Q9HBF4 777 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 GEMIN8Q9NWZ8 242 aaKnown RBP21.52■■□□□ 1.04
DDX39A-215ENST00000590696 HEY1Q9Y5J3 304 aa21.52■■□□□ 1.04
DDX39A-215ENST00000590696 KIR2DS5A0A0G2JLQ3 304 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 A0A0G2JNG1 304 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 LRRD1A4D1F6 860 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 KIR2DS3K7RE56 304 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 PPFIA2O75334 1257 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 ZNF8P17098 575 aaPredicted RBP21.51■■□□□ 1.03
DDX39A-215ENST00000590696 MAN1A1P33908 653 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 EPHA4P54764 986 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 AP1B1Q10567 949 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 KIR2DS5Q14953 304 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 ZNF648Q5T619 568 aaPredicted RBP21.51■■□□□ 1.03
DDX39A-215ENST00000590696 BORAQ6PGQ7 559 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 ATG14Q6ZNE5 492 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 GPR26Q8NDV2 337 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 TBC1D10AQ9BXI6 508 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 CEP41Q9BYV8 373 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 SPRY4Q9C004 299 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 SLC25A18Q9H1K4 315 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 OR2AG1Q9H205 316 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 PRDM8Q9NQV8 689 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 CPNE7Q9UBL6 633 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 KLHL3Q9UH77 587 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 IL17BQ9UHF5 180 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 PILRAQ9UKJ1 303 aa21.51■■□□□ 1.03
DDX39A-215ENST00000590696 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.51■■□□□ 1.032e-9■■■□□ 18.3
DDX39A-215ENST00000590696 BSNQ9UPA5 3926 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 OR5K4A6NMS3 321 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 SUV39H1O43463 412 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 SLC25A14O95258 325 aaPredicted RBP21.5■■□□□ 1.03
DDX39A-215ENST00000590696 PIRTP0C851 137 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 CSRP3P50461 194 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 ZNF569Q5MCW4 686 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 ALS2CLQ60I27 953 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 CEACAM20Q6UY09 585 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 PHYKPLQ8IUZ5 450 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.5■■□□□ 1.03
DDX39A-215ENST00000590696 TRIB3Q96RU7 358 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 TRIM39Q9HCM9 518 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 FBXO8Q9NRD0 319 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 KLC4Q9NSK0 619 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 SHOC2Q9UQ13 582 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 ADGRG1Q9Y653 693 aa21.5■■□□□ 1.03
DDX39A-215ENST00000590696 MYO18BQ8IUG5 2567 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 TERTO14746 1132 aaKnown RBP21.49■■□□□ 1.03
DDX39A-215ENST00000590696 TMEM253P0C7T8 217 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 CLCNKAP51800 687 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 ASTE1Q2TB18 679 aaPredicted RBP21.49■■□□□ 1.03
DDX39A-215ENST00000590696 SLC9A4Q6AI14 798 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 NT5DC3Q86UY8 548 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 NLGN4XQ8N0W4 816 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 NLGN4YQ8NFZ3 816 aaPredicted RBP21.49■■□□□ 1.03
DDX39A-215ENST00000590696 SLC35G2Q8TBE7 412 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 IMP4Q96G21 291 aaKnown RBP21.49■■□□□ 1.03
DDX39A-215ENST00000590696 AGAP3Q96P47 875 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 ZPBPQ9BS86 351 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 MAK16Q9BXY0 300 aaKnown RBP21.49■■□□□ 1.03
DDX39A-215ENST00000590696 XPO4Q9C0E2 1151 aaKnown RBP21.49■■□□□ 1.03
DDX39A-215ENST00000590696 OSGEPL1Q9H4B0 414 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 DEF6Q9H4E7 631 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 MAGEE1Q9HCI5 957 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 APMAPQ9HDC9 416 aa21.49■■□□□ 1.03
DDX39A-215ENST00000590696 C3orf70A6NLC5 250 aaPredicted RBP21.48■■□□□ 1.03
DDX39A-215ENST00000590696 ZNF891A8MT65 544 aaPredicted RBP21.48■■□□□ 1.03
DDX39A-215ENST00000590696 ZNF487B1APH4 448 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms