RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-216	ENST00000592444	FSCB	Q5H9T9	825 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	RRAGB	Q5VZM2	374 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	KCTD16	Q68DU8	428 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	ANKRD40	Q6AI12	368 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	OGFOD2	Q6N063	350 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	FDX2	Q6P4F2	183 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	RFWD3	Q6PCD5	774 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	ENPP7	Q6UWV6	458 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	TADA2B	Q86TJ2	420 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	LUZP1	Q86V48	1076 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	GPBP1	Q86WP2	473 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	APCDD1	Q8J025	514 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	ZBTB2	Q8N680	514 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	CSGALNACT2	Q8N6G5	542 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	TMEM161B	Q8NDZ6	487 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	ZMIZ2	Q8NF64	920 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	FIBIN	Q8TAL6	211 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	CXorf38	Q8TB03	319 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	ENOX1	Q8TC92	643 aa	Known RBP	4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	SHC3	Q92529	594 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	ZMYND19	Q96E35	227 aa	Predicted RBP	4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	TAAR6	Q96RI8	345 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	PPP1R9B	Q96SB3	815 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	PLIN2	Q99541	437 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	NTPCR	Q9BSD7	190 aa	Known RBP	4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	MED10	Q9BTT4	135 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	RAB34	Q9BZG1	259 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	UCK2	Q9BZX2	261 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	IKZF4	Q9H2S9	585 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	SNX25	Q9H3E2	840 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	TSPY26P	Q9H489	355 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	GRPEL1	Q9HAV7	217 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	ANLN	Q9NQW6	1124 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	DYRK4	Q9NR20	520 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	DMAC2	Q9NW81	257 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	BEX4	Q9NWD9	120 aa	Predicted RBP	4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	SIDT1	Q9NXL6	827 aa	Known RBP	4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	KLHL3	Q9UH77	587 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	SCML2	Q9UQR0	700 aa		4.93	□□□□□ -1.62
ERCC1-216	ENST00000592444	USF3	Q68DE3	2245 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	TRIM49B	A6NDI0	452 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	LRRC10B	A6NIK2	292 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	PDE2A	O00408	941 aa	Predicted RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	BIN1	O00499	593 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	HNRNPDL	O14979	420 aa	Known RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	ALOX15B	O15296	676 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	PPM1D	O15297	605 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	EIF3D	O15371	548 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	KLHL41	O60662	606 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	SPAG6	O75602	509 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	TNF	P01375	233 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	PIGR	P01833	764 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	CD53	P19397	219 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	UGT1A4	P22310	534 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	ARCN1	P48444	511 aa	Known RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	ARL4D	P49703	201 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	ZNF165	P49910	485 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	NDST1	P52848	882 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	GTF2B	Q00403	316 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	ZACN	Q401N2	412 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	EFHC1	Q5JVL4	640 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	C1orf220	Q5T0J3	134 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	PRAMEF17	Q5VTA0	474 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	PAQR9	Q6ZVX9	377 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	ERN2	Q76MJ5	926 aa	Known RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	GPRIN1	Q7Z2K8	1008 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	YTHDF3	Q7Z739	585 aa	Known RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	SCD5	Q86SK9	330 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	VPS36	Q86VN1	386 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	C17orf82	Q86X59	251 aa	Predicted RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	C12orf56	Q8IXR9	622 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	CARNMT1	Q8N4J0	409 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	TAB3	Q8N5C8	712 aa	Predicted RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	CPSF7	Q8N684	471 aa	Known RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	AOPEP	Q8N6M6	819 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	MLKL	Q8NB16	471 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	DENND6B	Q8NEG7	585 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	CCL4L1	Q8NHW4	92 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	KIAA1524	Q8TCG1	905 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	ZNF507	Q8TCN5	953 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	COG1	Q8WTW3	980 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	SMARCE1	Q969G3	411 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	TMEM125	Q96AQ2	219 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	CALML4	Q96GE6	196 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	AHCYL2	Q96HN2	611 aa	Known RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	OR6C1	Q96RD1	312 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	SMO	Q99835	787 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	MRPL45	Q9BRJ2	306 aa	Known RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	TIPIN	Q9BVW5	301 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	TTYH3	Q9C0H2	523 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	MBNL1	Q9NR56	388 aa	Known RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	ANO10	Q9NW15	660 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	COQ3	Q9NZJ6	369 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	MARCH2	Q9P0N8	246 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	SOX13	Q9UN79	622 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	SNX7	Q9UNH6	387 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	TRAF3IP3	Q9Y228	551 aa		4.92	□□□□□ -1.62
ERCC1-216	ENST00000592444	STYXL1	Q9Y6J8	313 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms