RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 RDH11Q8TC12 318 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 RRN3Q9NYV6 651 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 LIMD1Q9UGP4 676 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 VPS28Q9UK41 221 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 POLR3HQ9Y535 204 aaPredicted RBP13.59□□□□□ -0.23
NDEL1-204ENST00000578172 ZFP37Q9Y6Q3 630 aaPredicted RBP13.59□□□□□ -0.23
NDEL1-204ENST00000578172 DGKBQ9Y6T7 804 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 MBLAC1A4D2B0 266 aaPredicted RBP13.59□□□□□ -0.23
NDEL1-204ENST00000578172 PABPN1LA6NDY0 278 aaKnown RBP13.59□□□□□ -0.23
NDEL1-204ENST00000578172 TTC36A6NLP5 189 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 AP3B1O00203 1094 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 NME4O00746 187 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 WEE1P30291 646 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 RGRP47804 291 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 RPL38P63173 70 aaKnown RBP13.59□□□□□ -0.23
NDEL1-204ENST00000578172 LIPEQ05469 1076 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 FAM91A1Q658Y4 838 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 LZTR1Q8N653 840 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 OR52B6Q8NGF0 335 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 DNAAF2Q9NVR5 837 aaKnown RBP13.59□□□□□ -0.23
NDEL1-204ENST00000578172 KLQ9UEF7 1012 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 CDC14AQ9UNH5 594 aa13.59□□□□□ -0.23
NDEL1-204ENST00000578172 ATP5BP06576 529 aaKnown RBP13.58□□□□□ -0.23
NDEL1-204ENST00000578172 SCNN1AP37088 669 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 HSPA7P48741 367 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 PRKCQQ04759 706 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 PLD1Q13393 1074 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 MAPRE1Q15691 268 aaKnown RBP13.58□□□□□ -0.23
NDEL1-204ENST00000578172 CPSF6Q16630 551 aaKnown RBP eCLIP13.58□□□□□ -0.23
NDEL1-204ENST00000578172 CYS1Q717R9 158 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 TMCO2Q7Z6W1 182 aaPredicted RBP13.58□□□□□ -0.23
NDEL1-204ENST00000578172 EEF1AKMT1Q8WVE0 214 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 SDCCAG3Q96C92 435 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 ZIC5Q96T25 663 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 TLR9Q9NR96 1032 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 AASSQ9UDR5 926 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 GTF2IRD1Q9UHL9 959 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 GIT1Q9Y2X7 761 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 FCF1Q9Y324 198 aaKnown RBP13.58□□□□□ -0.23
NDEL1-204ENST00000578172 SPO11Q9Y5K1 396 aa13.58□□□□□ -0.23
NDEL1-204ENST00000578172 ECI2O75521 394 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 KCNH1O95259 989 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 S1PR4O95977 384 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 PRKACGP22612 351 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 NDST2P52849 883 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 CCDC126Q96EE4 140 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 TEX37Q96LM6 180 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 GPR78Q96P69 363 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 GID8Q9NWU2 228 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 RLFQ13129 1914 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 ALBP02768 609 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 BMP1P13497 986 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 CCND3P30281 292 aaPredicted RBP13.58□□□□□ -0.24
NDEL1-204ENST00000578172 ZNF678Q5SXM1 525 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 MFSD4BQ5TF39 518 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 PM20D1Q6GTS8 502 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 GPSM1Q86YR5 675 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 HS3ST5Q8IZT8 346 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 OR2T34Q8NGX1 318 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 OR2T3Q8NH03 318 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 PNPT1Q8TCS8 783 aaKnown RBP13.58□□□□□ -0.24
NDEL1-204ENST00000578172 ASB9Q96DX5 294 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 AURKBQ96GD4 344 aaPredicted RBP13.58□□□□□ -0.24
NDEL1-204ENST00000578172 CCDC28BQ9BUN5 200 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 C2orf81A6NN90 581 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 TRMUO75648 421 aaKnown RBP13.58□□□□□ -0.24
NDEL1-204ENST00000578172 GJB5O95377 273 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 CCL23P55773 120 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 BFSP2Q13515 415 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 DGCR6Q14129 220 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 GCNT7Q6ZNI0 430 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 ANKRD23Q86SG2 305 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 MON1AQ86VX9 555 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 CDKN2AIPNLQ96HQ2 116 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 SLC30A3Q99726 388 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 GSTO2Q9H4Y5 243 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 EBF1Q9UH73 591 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 POLG2Q9UHN1 485 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 ZNF229Q9UJW7 825 aa13.58□□□□□ -0.24
NDEL1-204ENST00000578172 TMA7Q9Y2S6 64 aaKnown RBP13.58□□□□□ -0.24
NDEL1-204ENST00000578172 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-204ENST00000578172 C1orf232A0A0U1RR37 186 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 GLTPD2A6NH11 291 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 TOR1BO14657 336 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 NBNO60934 754 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 VPS26AO75436 327 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
NDEL1-204ENST00000578172 ZNF177Q13360 481 aaPredicted RBP13.57□□□□□ -0.24
NDEL1-204ENST00000578172 HNRNPDQ14103 355 aaKnown RBP13.57□□□□□ -0.24
NDEL1-204ENST00000578172 ACAP2Q15057 778 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 MBOAT1Q6ZNC8 495 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 GALNT10Q86SR1 603 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 SLC22A15Q8IZD6 547 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 PGBD5Q8N414 524 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 TMEM151AQ8N4L1 468 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 ITCHQ96J02 903 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 BTBD9Q96Q07 612 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 IL12RB2Q99665 862 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 GPR62Q9BZJ7 368 aa13.57□□□□□ -0.24
NDEL1-204ENST00000578172 HPS4Q9NQG7 708 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms