RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 ACTRT2Q8TDY3 377 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 DNAJC9Q8WXX5 260 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 CD101Q93033 1021 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 CARS2Q9HA77 564 aaKnown RBP17.26■□□□□ 0.35
PTPN21-208ENST00000556564 ZNF232Q9UNY5 417 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 SLC10A7Q0GE19 358 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 PPM1JQ5JR12 505 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 CLHC1Q8NHS4 586 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 AZIN2Q96A70 460 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 WDR26Q9H7D7 661 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 CA14Q9ULX7 337 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 GJB5O95377 273 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 SQLEQ14534 574 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 ZNF460Q14592 562 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 RNF44Q7L0R7 432 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 PIWIL2Q8TC59 973 aaKnown RBP17.25■□□□□ 0.35
PTPN21-208ENST00000556564 N6AMT1Q9Y5N5 214 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 WNT9AO14904 365 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 CAPRIN2Q6IMN6 1127 aaKnown RBP17.25■□□□□ 0.35
PTPN21-208ENST00000556564 KRT73Q86Y46 540 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 NKD2Q969F2 451 aaPredicted RBP17.25■□□□□ 0.35
PTPN21-208ENST00000556564 TEKT5Q96M29 485 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 RIOK2Q9BVS4 552 aaKnown RBP17.25■□□□□ 0.35
PTPN21-208ENST00000556564 RFPL2O75678 378 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 UQCRBP14927 111 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 RPIAP49247 311 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 ANO7Q6IWH7 933 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 OLFML1Q6UWY5 402 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 NAPRTQ6XQN6 538 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 TCAIMQ8N3R3 496 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 EIF1ADQ8N9N8 165 aaKnown RBP17.25■□□□□ 0.35
PTPN21-208ENST00000556564 GNEQ9Y223 722 aaKnown RBP17.25■□□□□ 0.35
PTPN21-208ENST00000556564 POLR1DQ9Y2S0 133 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 CPED1A4D0V7 1026 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 SASH3O75995 380 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 DSG1Q02413 1049 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 MFSD5Q6N075 450 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 ZCCHC10Q8TBK6 192 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 GDPD5Q8WTR4 605 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 OLFM3Q96PB7 478 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 OSBPL2Q9H1P3 480 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 KCNK4Q9NYG8 393 aa17.25■□□□□ 0.35
PTPN21-208ENST00000556564 GCNT7Q6ZNI0 430 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 CYP4Z2PQ8N1L4 340 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 ITFG1Q8TB96 612 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 TMEM216Q9P0N5 145 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 SLC17A7Q9P2U7 560 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 VGLL3A8MV65 326 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 NR2F1P10589 423 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 BST1Q10588 318 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 UAP1L1Q3KQV9 507 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 NIPA2Q8N8Q9 360 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 FBXO30Q8TB52 745 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 GTPBP1O00178 669 aaKnown RBP17.24■□□□□ 0.35
PTPN21-208ENST00000556564 CBX6O95503 412 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 NAA20P61599 178 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 ITPRIPL2Q3MIP1 535 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 OTUD3Q5T2D3 398 aaPredicted RBP17.24■□□□□ 0.35
PTPN21-208ENST00000556564 OR13C4Q8NGS5 318 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 PHF24Q9UPV7 400 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 MFHAS1Q9Y4C4 1052 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 STYXL1Q9Y6J8 313 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 H3BN98 237 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 FOSL2P15408 326 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 MAGEA11P43364 429 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 HSPA7P48741 367 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 BLKP51451 505 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 MAPKAPK3Q16644 382 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 ZNF776Q68DI1 518 aaPredicted RBP17.24■□□□□ 0.35
PTPN21-208ENST00000556564 PDE12Q6L8Q7 609 aaKnown RBP17.24■□□□□ 0.35
PTPN21-208ENST00000556564 MSANTD2Q6P1R3 559 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 PPCDCQ96CD2 204 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 TSC22D3Q99576 134 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 CCDC177Q9NQR7 707 aaPredicted RBP17.24■□□□□ 0.35
PTPN21-208ENST00000556564 RAP2CQ9Y3L5 183 aa17.24■□□□□ 0.35
PTPN21-208ENST00000556564 ACP5P13686 325 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 BMPR1AP36894 532 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 NDUFA9Q16795 377 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 EID3Q8N140 333 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 BTBD1Q9H0C5 482 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 OR1F1O43749 312 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 MMP20O60882 483 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 PFDN1O60925 122 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 CCNYL2Q5T2Q4 361 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 COMMD2Q86X83 199 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 DENND6AQ8IWF6 608 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 POMGNT2Q8NAT1 580 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 DNAJB14Q8TBM8 379 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 MCMBPQ9BTE3 642 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 SLX4Q8IY92 1834 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 TEX28O15482 410 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 KLF8O95600 359 aaPredicted RBP17.23■□□□□ 0.35
PTPN21-208ENST00000556564 C2P06681 752 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 AAK1Q2M2I8 961 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 TXNRD3NBQ6F5E7 133 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 AGAP2Q99490 1192 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 BTBD10Q9BSF8 475 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 BRINP2Q9C0B6 783 aa17.23■□□□□ 0.35
PTPN21-208ENST00000556564 CDH19Q9H159 772 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms