RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 FAM174AQ8TBP5 190 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 LMX1AQ8TE12 382 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 ATXN7L3BQ96GX2 97 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 SPATA13Q96N96 652 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 LENG8Q96PV6 779 aaPredicted RBP9.39□□□□□ -0.91
VPS26B-207ENST00000532160 SMIM14Q96QK8 99 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 NUDCD1Q96RS6 583 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 KRT12Q99456 494 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 GORASP1Q9BQQ3 440 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 C1QTNF2Q9BXJ5 285 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 FRMD8P1Q9BZ68 369 aaPredicted RBP9.39□□□□□ -0.91
VPS26B-207ENST00000532160 SEMA4CQ9C0C4 833 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 SATB2Q9UPW6 733 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 DRG1Q9Y295 367 aaKnown RBP9.39□□□□□ -0.91
VPS26B-207ENST00000532160 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 BOD1L1Q8NFC6 3051 aa9.39□□□□□ -0.91
VPS26B-207ENST00000532160 MYO18BQ8IUG5 2567 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 UNC13CQ8NB66 2214 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 CPED1A4D0V7 1026 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 GOLGA6CA6NDK9 693 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 C5orf60A6NFR6 353 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 C16orf96A6NNT2 1141 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 H3BM21 787 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 FPGTO14772 594 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 KLK10O43240 276 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 PMPCBO75439 489 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 GCATO75600 419 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 STK10O94804 968 aaKnown RBP9.38□□□□□ -0.91
VPS26B-207ENST00000532160 KRT14P02533 472 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 PDHA1P08559 390 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 GOLGA6DP0CG33 693 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 STIP1P31948 543 aaKnown RBP9.38□□□□□ -0.91
VPS26B-207ENST00000532160 RPL22P35268 128 aaKnown RBP9.38□□□□□ -0.91
VPS26B-207ENST00000532160 IGFALSP35858 605 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 HSPA9P38646 679 aaKnown RBP9.38□□□□□ -0.91
VPS26B-207ENST00000532160 CSNK1DP48730 415 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 TMPRSS3P57727 454 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 ERVPABLB-1P60509 514 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 PFN3P60673 137 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 AP1S1P61966 158 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 SKOR1P84550 965 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 CFHR1Q03591 330 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 RAD51Q06609 339 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 BCL2L1Q07817 233 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 SPARCL1Q14515 664 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 PTPRRQ15256 657 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 ISXQ2M1V0 245 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 ZNF805Q5CZA5 627 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 PERM1Q5SV97 790 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 BROXQ5VW32 411 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 ZNF605Q86T29 641 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 PLPP6Q8IY26 295 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 LSMEM2Q8N112 164 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 CCDC89Q8N998 374 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 IPMKQ8NFU5 416 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 ATL2Q8NHH9 583 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 KCNE4Q8WWG9 221 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 IMP4Q96G21 291 aaKnown RBP9.38□□□□□ -0.91
VPS26B-207ENST00000532160 PRR11Q96HE9 360 aaPredicted RBP9.38□□□□□ -0.91
VPS26B-207ENST00000532160 OXNAD1Q96HP4 312 aaPredicted RBP9.38□□□□□ -0.91
VPS26B-207ENST00000532160 VAT1Q99536 393 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 SH3GL2Q99962 352 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 APOL2Q9BQE5 337 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 FERMT1Q9BQL6 677 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 LRRC1Q9BTT6 524 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 MLPHQ9BV36 600 aaPredicted RBP9.38□□□□□ -0.91
VPS26B-207ENST00000532160 SLC25A51Q9H1U9 297 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 GBA3Q9H227 469 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 SUV39H2Q9H5I1 410 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 ATP13A3Q9H7F0 1226 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 FAM114A2Q9NRY5 505 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 THSD1Q9NS62 852 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 HOMER3Q9NSC5 361 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 GOLGA6AQ9NYA3 693 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 AMACRQ9UHK6 382 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 TRHDEQ9UKU6 1024 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 CHKBQ9Y259 395 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 ENTPD2Q9Y5L3 495 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 CSNK1G3Q9Y6M4 447 aa9.38□□□□□ -0.91
VPS26B-207ENST00000532160 LRP4O75096 1905 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 A0A0U1RQS6 177 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 EME2A4GXA9 379 aaPredicted RBP9.37□□□□□ -0.91
VPS26B-207ENST00000532160 A8MX80 341 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 HMGB1P1B2RPK0 211 aaPredicted RBP9.37□□□□□ -0.91
VPS26B-207ENST00000532160 H3BQF6 201 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 NEMP1O14524 444 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 TRAFD1O14545 582 aaPredicted RBP9.37□□□□□ -0.91
VPS26B-207ENST00000532160 AREL1O15033 823 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 TTI1O43156 1089 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 TSPAN6O43657 245 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 ECEL1O95672 775 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 CELA2BP08218 269 aaPredicted RBP9.37□□□□□ -0.91
VPS26B-207ENST00000532160 CTPS1P17812 591 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 SERPINA4P29622 427 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 PTGIRP43119 386 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 CHRNA4P43681 627 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 FNTAP49354 379 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 PDX1P52945 283 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 DRG2P55039 364 aaKnown RBP9.37□□□□□ -0.91
VPS26B-207ENST00000532160 SGCGQ13326 291 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms