RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ATP11AP98196 1134 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 BCL2L1Q07817 233 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 KIR2DS5Q14953 304 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 LYPLAL1Q5VWZ2 237 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 IZUMO3Q5VZ72 239 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 DENND2CQ68D51 928 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 GJB7Q6PEY0 223 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 KRBA2Q6ZNG9 492 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 Q6ZS92 163 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 Q6ZVL8 140 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 CUZD1Q86UP6 607 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 TRIM74Q86UV6 250 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 NXPE1Q8N323 547 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 ARFGAP1Q8N6T3 406 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 PAF1Q8N7H5 531 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 RTL3Q8N8U3 475 aaKnown RBP13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 TSEN2Q8NCE0 465 aaKnown RBP13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 ITLN2Q8WWU7 325 aaPredicted RBP13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 NSMCE3Q96MG7 304 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 PDE7BQ9NP56 450 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 CHST11Q9NPF2 352 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 RARRES3Q9UL19 164 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 SLC30A1Q9Y6M5 507 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 FAM237AA0A1B0GTK4 181 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 J3KR12 359 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 UBXN7O94888 489 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 F3P13726 295 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 EDN3P14138 238 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 CAPN3P20807 821 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 VIPR1P32241 457 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 KRT9P35527 623 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 RRADP55042 308 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 UBE2IP63279 158 aaKnown RBP13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 DPTQ07507 201 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 TUBB3Q13509 450 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 ZNF235Q14590 738 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 ZNF630Q2M218 657 aaPredicted RBP13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 PARP15Q460N3 678 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 ANO6Q4KMQ2 910 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 TMCO4Q5TGY1 634 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 CACHD1Q5VU97 1274 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 FAM69BQ5VUD6 431 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 CYB5D1Q6P9G0 228 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 ADAMTSL4Q6UY14 1074 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 ZBTB2Q8N680 514 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 SPOCK2Q92563 424 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 C18orf8Q96DM3 657 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 CEP63Q96MT8 703 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 SCAND2PQ9GZW5 306 aaPredicted RBP13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 UCK1Q9HA47 277 aa13.69□□□□□ -0.22
NKX3-1-202ENST00000523261 WASH4PA8MWX3 477 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 GOLGA8SH3BPF8 625 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 NADKO95544 446 aaPredicted RBP13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 NEFLP07196 543 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 SLC2A4P14672 509 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 LHCGRP22888 699 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 HTR1EP28566 365 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 GPR1P46091 355 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 PDE1BQ01064 536 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 ATP1A4Q13733 1029 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 LLGL1Q15334 1064 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 KYNUQ16719 465 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 BNC2Q6ZN30 1099 aaPredicted RBP13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 CHST15Q7LFX5 561 aaPredicted RBP13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 LZTR1Q8N653 840 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 AVL9Q8NBF6 648 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 SHC3Q92529 594 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 MR1Q95460 341 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 CHST8Q9H2A9 424 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 SNX7Q9UNH6 387 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 KCNK6Q9Y257 313 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 PRKAB1Q9Y478 270 aa13.68□□□□□ -0.22
NKX3-1-202ENST00000523261 OR5K4A6NMS3 321 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 SNX2O60749 519 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 PRAMEF11O60813 436 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 DNAJC6O75061 913 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 FOLR1P15328 257 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 AMD1P17707 334 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 TNFAIP3P21580 790 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 SSTR2P30874 369 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 CDH5P33151 784 aaPredicted RBP13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 CA5AP35218 305 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 GPS2Q13227 327 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 CDO1Q16878 200 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 C15orf59Q2T9L4 293 aaPredicted RBP13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 C2CD6Q53TS8 623 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 HGSNATQ68CP4 663 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 TMEM26Q6ZUK4 368 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 ARCQ7LC44 396 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 TECPR1Q7Z6L1 1165 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 UMODL1-AS1Q8N2C9 162 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 CCDC185Q8N715 623 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 EMC1Q8N766 993 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 ENDOVQ8N8Q3 282 aaKnown RBP13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 RSC1A1Q92681 617 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 RELTQ969Z4 430 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 HDAC11Q96DB2 347 aa13.67□□□□□ -0.22
NKX3-1-202ENST00000523261 COX14Q96I36 57 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms