RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 OR4D2P58180 307 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 NFKB2Q00653 900 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 PIGFQ07326 219 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 DUSP28Q4G0W2 176 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 GALNT18Q6P9A2 607 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 RALGPS2Q86X27 583 aaPredicted RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 DDHD1Q8NEL9 900 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 OR13F1Q8NGS4 319 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 SNX19Q92543 992 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 BIRC7Q96CA5 298 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 RNF145Q96MT1 663 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 CD320Q9NPF0 282 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 GID8Q9NWU2 228 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 KCNH4Q9UQ05 1017 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 GPR45Q9Y5Y3 372 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 NLRC5Q86WI3 1866 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 PATJQ8NI35 1801 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 TMEM221A6NGB7 291 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 TRIM64BA6NI03 449 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 NCF1BA6NI72 391 aaPredicted RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 RRN3P2A6NIE6 340 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 NCF1CA8MVU1 366 aaPredicted RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 E9PAM4 449 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 AXIN1O15169 862 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 DYNC1LI2O43237 492 aaPredicted RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 ADAM23O75077 832 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 MATN4O95460 622 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 HAPLN1P10915 354 aaPredicted RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 NCF1P14598 390 aaPredicted RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 IL7RP16871 459 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 FDXRP22570 491 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 EEF1DP29692 281 aaKnown RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 GJA5P36382 358 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 RXRGP48443 463 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 HLCSP50747 726 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 EIF4EBP2Q13542 120 aaPredicted RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 NR1D2Q14995 579 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 TIGD2Q4W5G0 525 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 HABP4Q5JVS0 413 aaKnown RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 SIRPB2Q5JXA9 342 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 ANKRD34AQ69YU3 496 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 BTLAQ7Z6A9 289 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 ESAMQ96AP7 390 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 LHPPQ9H008 270 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 ATP13A1Q9HD20 1204 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 HACD3Q9P035 362 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 HS3ST4Q9Y661 456 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 ARL5AQ9Y689 179 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 SNAP91O60641 907 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 SERPINB7O75635 380 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 RSL1D1O76021 490 aaKnown RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 FGF4P08620 206 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 CCNA2P20248 432 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 IL12AP29459 219 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 HOXC13P31276 330 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 LHX1P48742 406 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 ZNF135P52742 658 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 SELPLGQ14242 412 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 AAK1Q2M2I8 961 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 TIGD5Q53EQ6 642 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 XAF1Q6GPH4 301 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 IMP4Q96G21 291 aaKnown RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 ATOH8Q96SQ7 321 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 CHID1Q9BWS9 393 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 SLC25A51Q9H1U9 297 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 MFSD1Q9H3U5 465 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 CATSPERBQ9H7T0 1116 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 NTN4Q9HB63 628 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 INTS10Q9NVR2 710 aaKnown RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 TRNAU1APQ9NX07 287 aaKnown RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 PKD2L2Q9NZM6 624 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 C1orf232A0A0U1RR37 186 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 A0A1W2PP18 115 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 UNCXA6NJT0 531 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 SUPT3HB4E1H0 165 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 SYNCRIPO60506 623 aaKnown RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 COQ9O75208 318 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 CNTN5O94779 1100 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 DDNO94850 711 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 CPNE6O95741 557 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 GOT2P00505 430 aaKnown RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 LDLRP01130 860 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 HOXD8P13378 290 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 ZNF37AP17032 561 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 AGTR2P50052 363 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 BCAP31P51572 246 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 PLIN5Q00G26 463 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 CACNB2Q08289 660 aaPredicted RBP11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 CYP2A13Q16696 494 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 CCNYL2Q5T2Q4 361 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 UGT3A1Q6NUS8 523 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 ZNF354CQ86Y25 554 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 OR13C4Q8NGS5 318 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 OR2T11Q8NH01 316 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 HMCESQ96FZ2 354 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 GLT1D1Q96MS3 346 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 ACOX2Q99424 681 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 TRIM54Q9BYV2 358 aa11.67□□□□□ -0.54
PDZRN3-203ENST00000462146 ARNT2Q9HBZ2 717 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms