RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MSLNQ13421 630 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 ANKS3Q6ZW76 656 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CAND1Q86VP6 1230 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 MTERF3Q96E29 417 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 OTUB1Q96FW1 271 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 COPS8Q99627 209 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 SIKE1Q9BRV8 207 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 ARHGAP39Q9C0H5 1083 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 KRT84Q9NSB2 600 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 GALPQ9UBC7 116 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 ZDHHC2Q9UIJ5 367 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 VPS4AQ9UN37 437 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 SH3GLB1Q9Y371 365 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TCAF1Q9Y4C2 921 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TEX264Q9Y6I9 313 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TLL2Q9Y6L7 1015 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 DGKBQ9Y6T7 804 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 UPK3BL1B0FP48 263 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 UPK3BL2E5RIL1 263 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 AOC2O75106 756 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 PRAMEF1O95521 474 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CAPN1P07384 714 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 COL6A1P12109 1028 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 IMPDH2P12268 514 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CYP2A7P20853 494 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 THOP1P52888 689 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TRIM25Q14258 630 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 NUDT18Q6ZVK8 323 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 SIGLEC10Q96LC7 697 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 IPPKQ9H8X2 491 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 ARHGEF3Q9NR81 526 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 DNAJB4Q9UDY4 337 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 DUSP12Q9UNI6 340 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 MTF2Q9Y483 593 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CPQQ9Y646 472 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 LRRC14BA6NHZ5 514 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 SAP18O00422 153 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 PRMT5O14744 637 aaPredicted RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 HNRNPRO43390 633 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 RGS14O43566 566 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 DUSP11O75319 330 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 LYNP07948 512 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 TTPAP49638 278 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 ARL4DP49703 201 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 KPNA1P52294 538 aaPredicted RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 HK2P52789 917 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 DGKQP52824 942 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 POU5F1Q01860 360 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 SLC44A4Q53GD3 710 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 DGKKQ5KSL6 1271 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 DDI2Q5TDH0 399 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 PRR23CQ6ZRP0 262 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 EID3Q8N140 333 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 ZCCHC7Q8N3Z6 543 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 NKAPQ8N5F7 415 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 ZNF398Q8TD17 642 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 CRYGNQ8WXF5 182 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 MTERF1Q99551 399 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 GEMIN8Q9NWZ8 242 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 MIOSQ9NXC5 875 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 MCM8Q9UJA3 840 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 ASF1AQ9Y294 204 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 ASXL3Q9C0F0 2248 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 IFRD1O00458 451 aaPredicted RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 SLC22A3O75751 556 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 DBTP11182 482 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 DGKAP23743 735 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 SERPINB1P30740 379 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 CTNNB1P35222 781 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 HSPA13P48723 471 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 CHPFQ8IZ52 775 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 C7orf57Q8NEG2 295 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 APBB2Q92870 758 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 VMP1Q96GC9 406 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 TRAPPC9Q96Q05 1148 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 PTPN18Q99952 460 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 EXD2Q9NVH0 621 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 PRKAG3Q9UGI9 489 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 FBXO10Q9UK96 956 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 OGDHLQ9ULD0 1010 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 PTGDR2Q9Y5Y4 395 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 ACTL7AQ9Y615 435 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 MYO5AQ9Y4I1 1855 aaKnown RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 MATN3O15232 486 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 DLX3O60479 287 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 ZNF189O75820 626 aaPredicted RBP9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 CCNFP41002 786 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 USP46P62068 366 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 HTRA3P83110 453 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 CLCQ05315 142 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 CCDC15Q0P6D6 951 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 CNTN1Q12860 1018 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 NAE1Q13564 534 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 LAPTM4AQ15012 233 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 TSTD2Q5T7W7 516 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 ITIH5Q86UX2 942 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 RORBQ92753 470 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 C7orf26Q96N11 449 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 TEX12Q9BXU0 123 aa9.06□□□□□ -0.96
SMARCA1-202ENST00000371122 EMILIN2Q9BXX0 1053 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms