RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 SCAPQ12770 1279 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 DMC1Q14565 340 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 PPP1R3AQ16821 1122 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 PIK3R6Q5UE93 754 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 RNF19BQ6ZMZ0 732 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ZNF276Q8N554 614 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 FAM47BQ8NA70 645 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ACVR1CQ8NER5 493 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 MAPK15Q8TD08 544 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 WNK3Q9BYP7 1800 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 UNCXA6NJT0 531 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 TMEM88BA6NKF7 163 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 C5orf58C9J3I9 102 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 MGEA5O60502 916 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 SNNO75324 88 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-206ENST00000368215 SORBS2O94875 1100 aaKnown RBP8.42□□□□□ -1.06
PTPRK-206ENST00000368215 SNUPNO95149 360 aaKnown RBP8.42□□□□□ -1.06
PTPRK-206ENST00000368215 UGT2B4P06133 528 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 CYP2A7P20853 494 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ECT2LQ008S8 904 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 IRF8Q02556 426 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 TRIM25Q14258 630 aaKnown RBP8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ACOX1Q15067 660 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 AP5B1Q2VPB7 878 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 MORN1Q5T089 497 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 TRMT11Q7Z4G4 463 aaKnown RBP8.42□□□□□ -1.06
PTPRK-206ENST00000368215 CPSF7Q8N684 471 aaKnown RBP8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ELMO1Q92556 727 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 KCNA7Q96RP8 456 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 TUBGCP5Q96RT8 1024 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 SH3GL1Q99961 368 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 MFSD1Q9H3U5 465 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 CPQQ9Y646 472 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ARFGEF1Q9Y6D6 1849 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 MTMR11A4FU01 709 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 CDC7O00311 574 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ALDH1A2O94788 518 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 OTCP00480 354 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ALPIP09923 528 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 CDH2P19022 906 aaPredicted RBP8.42□□□□□ -1.06
PTPRK-206ENST00000368215 CES1P23141 567 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ARSDP51689 593 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 USP46P62068 366 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 CILP2Q8IUL8 1156 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 RBFAQ8N0V3 343 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ATG16L2Q8NAA4 619 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 FEM1CQ96JP0 617 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 TSSK3Q96PN8 268 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 MKS1Q9NXB0 559 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 EURLQ9NYK6 297 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 COL4A5P29400 1685 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 ANKRD31Q8N7Z5 1873 aa8.42□□□□□ -1.06
PTPRK-206ENST00000368215 SBF2Q86WG5 1849 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 E7ENX8 843 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ENPP3O14638 875 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ZSCAN9O15535 394 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 KCNH1O95259 989 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 CAPN1P07384 714 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 GM2AP17900 193 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 UGT1A6P19224 532 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 IMPDH1P20839 514 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 UGT1A1P22309 533 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 UGT1A4P22310 534 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 MAPK1P28482 360 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 UGT1A3P35503 534 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 UGT1A5P35504 534 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 RPL5P46777 297 aaKnown RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 IL5RAQ01344 420 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ADRM1Q16186 407 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ZNF789Q5FWF6 425 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 TXNDC11Q6PKC3 985 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ZDHHC13Q8IUH4 622 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 P3H2Q8IVL5 708 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 C2CD4AQ8NCU7 369 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ADCY4Q8NFM4 1077 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ZFRQ96KR1 1074 aaKnown RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 TSGA13Q96PP4 275 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 TCF12Q99081 682 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 COPS8Q99627 209 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 AKTIPQ9H8T0 292 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 IPPKQ9H8X2 491 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 SPG21Q9NZD8 308 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 MARCH4Q9P2E8 410 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 LRRC42Q9Y546 428 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 LY75O60449 1722 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 TRAV19A0A0A6YYK7 116 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 LIN7AO14910 233 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ZNF623O75123 536 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 GABBR2O75899 941 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 HNRNPCP07910 306 aaKnown RBP eCLIP8.41□□□□□ -1.065e-7■■□□□ 13
PTPRK-206ENST00000368215 CKMT2P17540 419 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 CCNHP51946 323 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 DLG1Q12959 904 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 ABRQ12979 859 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 MAD2L1Q13257 205 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-206ENST00000368215 SLC5A9Q2M3M2 681 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 IL23RQ5VWK5 629 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 SPESP1Q6UW49 350 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 CYS1Q717R9 158 aa8.41□□□□□ -1.06
PTPRK-206ENST00000368215 SERPINA9Q86WD7 417 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms