RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PIGMQ9H3S5 423 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 ESRP2Q9H6T0 727 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 DNAJC18Q9H819 358 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 MBNL1Q9NR56 388 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 KLHL13Q9P2N7 655 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 MAP2K7O14733 419 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 PROP1O75360 226 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 BAG2O95816 211 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 FSHBP01225 129 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 ICAM1P05362 532 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 CTSAP10619 480 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 UBA1P22314 1058 aaKnown RBP5.13□□□□□ -1.59
LINC00397-202ENST00000606785 PROZP22891 400 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 GPTP24298 496 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 PPP3CCP48454 512 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 NPY4RP50391 375 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 HMGA2P52926 109 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 POLGP54098 1239 aaPredicted RBP5.13□□□□□ -1.59
LINC00397-202ENST00000606785 GHRHRQ02643 423 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 GAD2Q05329 585 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 SPOCK1Q08629 439 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 RALGDSQ12967 914 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 NEDD9Q14511 834 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 MMEL1Q495T6 779 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 EPHA10Q5JZY3 1008 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 ARMC4Q5T2S8 1044 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 GGNBP1Q5YKI7 109 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 ANKRD54Q6NXT1 300 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 METTL2BQ6P1Q9 378 aaKnown RBP5.13□□□□□ -1.59
LINC00397-202ENST00000606785 ZNF793Q6ZN11 406 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 HAUS6Q7Z4H7 955 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 SDCCAG8Q86SQ7 713 aaPredicted RBP5.13□□□□□ -1.59
LINC00397-202ENST00000606785 GPSM1Q86YR5 675 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 SPATA6LQ8N4H0 392 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 SLC44A5Q8NCS7 719 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 MSANTD4Q8NCY6 345 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 SEMA6DQ8NFY4 1073 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 OR10S1Q8NGN2 331 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 CFAP61Q8NHU2 1237 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 ERGIC1Q969X5 290 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 METTL2AQ96IZ6 378 aaKnown RBP5.13□□□□□ -1.59
LINC00397-202ENST00000606785 ZNF830Q96NB3 372 aaPredicted RBP5.13□□□□□ -1.59
LINC00397-202ENST00000606785 DACH2Q96NX9 599 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 NUP85Q9BW27 656 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 MRPL9Q9BYD2 267 aaKnown RBP5.13□□□□□ -1.59
LINC00397-202ENST00000606785 FAM129AQ9BZQ8 928 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 CHMP4BQ9H444 224 aaKnown RBP5.13□□□□□ -1.59
LINC00397-202ENST00000606785 RETREG1Q9H6L5 497 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 MAGIXQ9H6Y5 334 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 PDGFCQ9NRA1 345 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 OLAHQ9NV23 265 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 OR14J1Q9UGF5 321 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 DDX25Q9UHL0 483 aaKnown RBP5.13□□□□□ -1.59
LINC00397-202ENST00000606785 HACL1Q9UJ83 578 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 INSL6Q9Y581 213 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 SNX5Q9Y5X3 404 aa5.13□□□□□ -1.59
LINC00397-202ENST00000606785 A0A0G2JK05 382 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 EDDM13A0A1B0GTR0 161 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 CPED1A4D0V7 1026 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 A6NNC1 897 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 SPRY1O43609 319 aaPredicted RBP5.12□□□□□ -1.59
LINC00397-202ENST00000606785 SLCO2B1O94956 709 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 TRUB2O95900 331 aaKnown RBP5.12□□□□□ -1.59
LINC00397-202ENST00000606785 CYC1P08574 325 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 C6P13671 934 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 ATP6V1B1P15313 513 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 GJA1P17302 382 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 DDX5P17844 614 aaKnown RBP5.12□□□□□ -1.59
LINC00397-202ENST00000606785 MAOAP21397 527 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 RAD23BP54727 409 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 SIRPAP78324 504 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 MIS18BP1Q6P0N0 1132 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 PATL1Q86TB9 770 aaKnown RBP5.12□□□□□ -1.59
LINC00397-202ENST00000606785 LDB1Q86U70 411 aaPredicted RBP5.12□□□□□ -1.59
LINC00397-202ENST00000606785 ADIPOR2Q86V24 386 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 CAMKVQ8NCB2 501 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 RBM15BQ8NDT2 890 aaKnown RBP5.12□□□□□ -1.59
LINC00397-202ENST00000606785 TMEM163Q8TC26 289 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 GPT2Q8TD30 523 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 SLC35F5Q8WV83 523 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 WDR77Q9BQA1 342 aaPredicted RBP5.12□□□□□ -1.59
LINC00397-202ENST00000606785 KCNK15Q9H427 330 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 GOLPH3LQ9H4A5 285 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 TASP1Q9H6P5 420 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 PPP1R3EQ9H7J1 279 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 MAP6D1Q9H9H5 199 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 ACSS1Q9NUB1 689 aaPredicted RBP5.12□□□□□ -1.59
LINC00397-202ENST00000606785 IL17BQ9UHF5 180 aa5.12□□□□□ -1.59
LINC00397-202ENST00000606785 TRAV34A0A0B4J273 112 aa5.11□□□□□ -1.59
LINC00397-202ENST00000606785 WIPF3A6NGB9 483 aa5.11□□□□□ -1.59
LINC00397-202ENST00000606785 IPO8O15397 1037 aaKnown RBP5.11□□□□□ -1.59
LINC00397-202ENST00000606785 TLX3O43711 291 aaPredicted RBP5.11□□□□□ -1.59
LINC00397-202ENST00000606785 SYNCRIPO60506 623 aaKnown RBP5.11□□□□□ -1.59
LINC00397-202ENST00000606785 GH2P01242 217 aa5.11□□□□□ -1.59
LINC00397-202ENST00000606785 CHRNB1P11230 501 aa5.11□□□□□ -1.59
LINC00397-202ENST00000606785 VPREB1P12018 145 aa5.11□□□□□ -1.59
LINC00397-202ENST00000606785 CHRNB2P17787 502 aa5.11□□□□□ -1.59
LINC00397-202ENST00000606785 GRIK2Q13002 908 aa5.11□□□□□ -1.59
LINC00397-202ENST00000606785 LAMB3Q13751 1172 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms