RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 FAM185AQ8N0U4 392 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 TMEM199Q8N511 208 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 CMASQ8NFW8 434 aaPredicted RBP3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 SCFD2Q8WU76 684 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 ZSCAN31Q96LW9 406 aaPredicted RBP3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 SCLT1Q96NL6 688 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 FRG2BQ96QU4 278 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 LBHD1Q9BQE6 289 aaPredicted RBP3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 LZTS2Q9BRK4 669 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 PYM1Q9BRP8 204 aaKnown RBP3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 SPZ1Q9BXG8 430 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 FAM234AQ9H0X4 552 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 ZDHHC7Q9NXF8 308 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 CD207Q9UJ71 328 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 TBX21Q9UL17 535 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 FRMPD4Q14CM0 1322 aa3.84□□□□□ -1.79
CKS1BP3-201ENST00000600888 NCOR1O75376 2440 aa3.84□□□□□ -1.8
CKS1BP3-201ENST00000600888 LAMA2P24043 3122 aaKnown RBP3.84□□□□□ -1.8
CKS1BP3-201ENST00000600888 CUL9Q8IWT3 2517 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CD8B2A6NJW9 211 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 C17orf100A8MU93 164 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 SH2B2O14492 632 aaPredicted RBP3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 EIF3JO75822 258 aaKnown RBP3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 STAM2O75886 525 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 TOMM40O96008 361 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 TIMP1P01033 207 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 KLKB1P03952 638 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CNPP09543 421 aaKnown RBP3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CALM1P0DP23 149 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CALM2P0DP24 149 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CALM3P0DP25 149 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 TGFB3P10600 412 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 HSD3B1P14060 373 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CPA1P15085 419 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 PRKCHP24723 683 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 ITGB8P26012 769 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CALML3P27482 149 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 KIF5BP33176 963 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 MTNR1AP48039 350 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 GNAQP50148 359 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 BEX3Q00994 111 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 ITGA7Q13683 1181 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 PKP1Q13835 747 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 KRT32Q14532 448 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 PPP2R5BQ15173 497 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 ANKRD1Q15327 319 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 ZRSR2Q15696 482 aaKnown RBP3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 STXBP2Q15833 593 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 AP5B1Q2VPB7 878 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 USH1GQ495M9 461 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 Q5PR19 223 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 SH2D4BQ5SQS7 431 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 TMEM268Q5VZI3 342 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 DENND1BQ6P3S1 775 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CASC1Q6TDU7 716 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CXCL17Q6UXB2 119 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 FBXO16Q8IX29 292 aaPredicted RBP3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 FAM217AQ8IXS0 508 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 FBXL16Q8N461 479 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 DPP10Q8N608 796 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 SCAIQ8N9R8 606 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 KDM1BQ8NB78 822 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CTCFLQ8NI51 663 aaPredicted RBP3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 HDAC7Q8WUI4 952 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 NSMCE1Q8WV22 266 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 FAR1Q8WVX9 515 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 NCSTNQ92542 709 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 INPP5DQ92835 1189 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 BADQ92934 168 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 TAAR1Q96RJ0 339 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 IFT27Q9BW83 186 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CTDSP1Q9GZU7 261 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 CPVLQ9H3G5 476 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 LY9Q9HBG7 655 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 PXMP2Q9NR77 195 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 TBC1D14Q9P2M4 693 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 UPB1Q9UBR1 384 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 ICKQ9UPZ9 632 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 OSGIN2Q9Y236 505 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 DGKBQ9Y6T7 804 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 GRIN2DO15399 1336 aa3.83□□□□□ -1.8
CKS1BP3-201ENST00000600888 NLRC5Q86WI3 1866 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 SIP14410 1827 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 TARSL2A2RTX5 802 aaKnown RBP3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 TMCC1O94876 653 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 DDAH2O95865 285 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 GH1P01241 217 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 SUPT20HL2P0C7V6 817 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 POLR2MP0CAP2 368 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 SCP2P22307 547 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 ICAM3P32942 547 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 TNFSF8P32971 234 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 HSPA4P34932 840 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 GJC1P36383 396 aa3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 SKIV2L2P42285 1042 aaKnown RBP3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 PPM1FP49593 454 aaPredicted RBP3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 POLGP54098 1239 aaPredicted RBP3.82□□□□□ -1.8
CKS1BP3-201ENST00000600888 KRTAP10-11P60412 298 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms