RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 ATP8A1Q9Y2Q0 1164 aa5.7□□□□□ -1.5
KDM3B-205ENST00000508386 TMEM98Q9Y2Y6 226 aa5.7□□□□□ -1.5
KDM3B-205ENST00000508386 PCDHGA6Q9Y5G7 932 aa5.7□□□□□ -1.5
KDM3B-205ENST00000508386 ZGRF1Q86YA3 2104 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 CFAP69A5D8W1 941 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 A6NCN8 305 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 FOXN3O00409 490 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 TRAFD1O14545 582 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 POLR1CO15160 346 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 RAMP2O60895 175 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 KIAA0754O94854 1291 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ZNF202O95125 648 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 IGSF6O95976 241 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 RECKO95980 971 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 F9P00740 461 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 IL2RAP01589 272 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 PLEKP08567 350 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 MYCLP1P12525 358 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 GABRB2P47870 512 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 MAPKAPK2P49137 400 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 CCL11P51671 97 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 SUOXP51687 545 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 GDF10P55107 478 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 GFERP55789 205 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ATP11AP98196 1134 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 CDK3Q00526 305 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ILF3Q12906 894 aaKnown RBP eCLIP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 IL10RAQ13651 578 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 TESK1Q15569 626 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 C15orf59Q2T9L4 293 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 PLEKHN1Q494U1 663 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 CCDC14Q49A88 953 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 INO80DQ53TQ3 878 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ZNF658Q5TYW1 1059 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 FAM69BQ5VUD6 431 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 SLC6A19Q695T7 634 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 SP5Q6BEB4 398 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ISM2Q6H9L7 571 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 RWDD4Q6NW29 188 aaKnown RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 FAM199XQ6PEV8 388 aaPredicted RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 DPPA4Q7L190 304 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 HSD11B1LQ7Z5J1 315 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ZC3H18Q86VM9 953 aaKnown RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 TP53INP2Q8IXH6 220 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 CCDC185Q8N715 623 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 EMC1Q8N766 993 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 TSEN2Q8NCE0 465 aaKnown RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 FDCSPQ8NFU4 85 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 RNF217Q8TC41 542 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 CT55Q8WUE5 264 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 SHC3Q92529 594 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 NCSTNQ92542 709 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ELMO2Q96JJ3 720 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 SMIM14Q96QK8 99 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 BARD1Q99728 777 aaKnown RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 DPYSL5Q9BPU6 564 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ZPBPQ9BS86 351 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 SLC25A23Q9BV35 468 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 TBC1D10AQ9BXI6 508 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 GSDMCQ9BYG8 508 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ULBP3Q9BZM4 244 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 TWSG1Q9GZX9 223 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 TRIT1Q9H3H1 467 aaKnown RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 WDR26Q9H7D7 661 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ETNK1Q9HBU6 452 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 SIX2Q9NPC8 291 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 RRN3Q9NYV6 651 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 KLHL3Q9UH77 587 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 SLC5A6Q9Y289 635 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 NTNG1Q9Y2I2 539 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 ZDHHC9Q9Y397 364 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 PCDHGA9Q9Y5G4 932 aaKnown RBP5.69□□□□□ -1.5
KDM3B-205ENST00000508386 MYO7BQ6PIF6 2116 aa5.69□□□□□ -1.5
KDM3B-205ENST00000508386 GOLGA6L3A6NEY3 463 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 FIGNL2A6NMB9 653 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 RASA4BC9J798 803 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 RASA4O43374 803 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 HNRNPRO43390 633 aaKnown RBP5.68□□□□□ -1.5
KDM3B-205ENST00000508386 KIF1CO43896 1103 aaKnown RBP5.68□□□□□ -1.5
KDM3B-205ENST00000508386 C9P02748 559 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 IVLP07476 585 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 LHCGRP22888 699 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 XPAP23025 273 aaPredicted RBP5.68□□□□□ -1.5
KDM3B-205ENST00000508386 KELP23276 732 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 NFKBIAP25963 317 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 CDH5P33151 784 aaPredicted RBP5.68□□□□□ -1.5
KDM3B-205ENST00000508386 USP8P40818 1118 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 ETV3P41162 512 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 ACTR1BP42025 376 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 LEPRP48357 1165 aaKnown RBP5.68□□□□□ -1.5
KDM3B-205ENST00000508386 PGDP52209 483 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 NDST2P52849 883 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 COPB1P53618 953 aaKnown RBP5.68□□□□□ -1.5
KDM3B-205ENST00000508386 MARSP56192 900 aaKnown RBP5.68□□□□□ -1.5
KDM3B-205ENST00000508386 HDAC4P56524 1084 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 GEMIN4P57678 1058 aaKnown RBP5.68□□□□□ -1.5
KDM3B-205ENST00000508386 ACTR1AP61163 376 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 GPLD1P80108 840 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 LRRC63Q05C16 580 aa5.68□□□□□ -1.5
KDM3B-205ENST00000508386 RAD51Q06609 339 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms