RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 USP41Q3LFD5 358 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 ACCSLQ4AC99 568 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 C6orf141Q5SZD1 244 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 PMS2CLQ68D20 193 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 PLA2G4FQ68DD2 849 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 SIGIRRQ6IA17 410 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 ZNF852Q6ZMS4 543 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 DPPA4Q7L190 304 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 NRROSQ86YC3 692 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 OR14L1PQ8NHC6 308 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 MAGEC3Q8TD91 643 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 SLC44A1Q8WWI5 657 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 PSPC1Q8WXF1 523 aaKnown RBP3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 PIGTQ969N2 578 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 IGSF8Q969P0 613 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 ZUFSPQ96AP4 578 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 EIF2AK1Q9BQI3 630 aaKnown RBP3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 TMEM47Q9BQJ4 181 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 POLR3CQ9BUI4 534 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 ABI3Q9P2A4 366 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 GJD2Q9UKL4 321 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 FAF1Q9UNN5 650 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 DLGAP4Q9Y2H0 992 aa3.29□□□□□ -1.88
HMGB1P29-201ENST00000505659 PTPRCP08575 1304 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 KDM3AQ9Y4C1 1321 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 FAM237AA0A1B0GTK4 181 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 A6NLC8 198 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 NKX2-2O95096 273 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 KCNK5O95279 499 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 XBP1P17861 261 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 CD53P19397 219 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 FOXM1Q08050 763 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 TBX2Q13207 712 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 GTF2H2Q13888 395 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 ZRSR2Q15696 482 aaKnown RBP3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 GSTA3Q16772 222 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 TMEM95Q3KNT9 176 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 CDONQ4KMG0 1287 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 SIRPB2Q5JXA9 342 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 FRG2Q64ET8 278 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 TRNP1Q6NT89 227 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 GTF2H2CQ6P1K8 395 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 BRAT1Q6PJG6 821 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 NFE4Q86UQ8 179 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 APBB2Q92870 758 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 ZNF501Q96CX3 271 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 ACOX2Q99424 681 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 PCGF1Q9BSM1 259 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 SCPEP1Q9HB40 452 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 HAO1Q9UJM8 370 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 KLHL20Q9Y2M5 609 aa3.28□□□□□ -1.88
HMGB1P29-201ENST00000505659 CCDC196A0A1B0GTZ2 297 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 C1orf226A1L170 272 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 DVL1O14640 695 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 SPINT2O43291 252 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 WDR1O75083 606 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 MLYCDO95822 493 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 ATP1A3P13637 1013 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 KRT10P13645 584 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 ANOS1P23352 680 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 RGS2P41220 211 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 DVL1P1P54792 670 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 F2RL1P55085 397 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 EIF3BP55884 814 aaKnown RBP3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 CLDN20P56880 219 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 HILS1P60008 231 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 CEBPZQ03701 1054 aaKnown RBP3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 ZNF234Q14588 700 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 OR7E24Q6IFN5 339 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 ACAD10Q6JQN1 1059 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 CDC73Q6P1J9 531 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 FAM171BQ6P995 826 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 TSSK4Q6SA08 328 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 OR52I2Q8NH67 350 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 KCNG4Q8TDN1 519 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 SAAL1Q96ER3 474 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 RRNAD1Q96FB5 475 aaKnown RBP3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 QRFPRQ96P65 431 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 ZNF696Q9H7X3 374 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 ASAH2Q9NR71 780 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 PDP2Q9P2J9 529 aa3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 CNOT8Q9UFF9 292 aaKnown RBP3.27□□□□□ -1.89
HMGB1P29-201ENST00000505659 NPIPB15A6NHN6 443 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 TTC36A6NLP5 189 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 TPD52L2O43399 206 aaKnown RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 AGR2O95994 175 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 CGAP01215 116 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 POLR2CP19387 275 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 PBX3P40426 434 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 APOBEC1P41238 236 aaKnown RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 AMPHP49418 695 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 COG7P83436 770 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 FOXD4Q12950 439 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 FRG1Q14331 258 aaKnown RBP3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 DECR1Q16698 335 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 CEP85LQ5SZL2 805 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 C18orf63Q68DL7 685 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 ADAM5Q6NVV9 412 aa3.26□□□□□ -1.89
HMGB1P29-201ENST00000505659 ATG9AQ7Z3C6 839 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms