RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 SEC22BO75396 215 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 CPSF4O95639 269 aaKnown RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 CDH3P22223 829 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 DEFA1P59665 94 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 DEFA3P59666 94 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 IRF9Q00978 393 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 UBE3AQ05086 875 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 NADK2Q4G0N4 442 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 ARL13AQ5H913 290 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 ERAP2Q6P179 960 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 TTC9BQ8N6N2 239 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 ARFGAP1Q8N6T3 406 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 PANX3Q96QZ0 392 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 MYOCQ99972 504 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 GATA5Q9BWX5 397 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-218ENST00000482171 USP29Q9HBJ7 922 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 HPS4Q9NQG7 708 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 PNPLA3Q9NST1 481 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 SLC2A6Q9UGQ3 507 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 DPP7Q9UHL4 492 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 TLR6Q9Y2C9 796 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 RAP2CQ9Y3L5 183 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 PSAT1Q9Y617 370 aa11.29□□□□□ -0.6
SMPD4-218ENST00000482171 PDZK1P1A8MUH7 402 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 EVPLLA8MZ36 301 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 PSMD12O00232 456 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 SNAP91O60641 907 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 OR56A5P0C7T3 313 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 PSMB9P28065 219 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 PIK3CGP48736 1102 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 PGGT1BP53609 377 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 POLR2LP62875 67 aaKnown RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 ASRGL1Q7L266 308 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 LRRTM3Q86VH5 581 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 P3H2Q8IVL5 708 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 RAB42Q8N4Z0 105 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 TERB1Q8NA31 727 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 ABHD8Q96I13 439 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 C1orf50Q9BV19 199 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 HECAQ9UBI9 543 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 OPTCQ9UBM4 332 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 YIPF1Q9Y548 306 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 A0A1B0GVG6 124 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 MFN2O95140 757 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 LDLRP01130 860 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 IVDP26440 423 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 SETMARQ53H47 684 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 ALFQ53S48 1182 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 SUSD6Q92537 303 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 GPR21Q99679 349 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 NOL11Q9H8H0 719 aaKnown RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 CLK4Q9HAZ1 481 aaKnown RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 CIDEBQ9UHD4 219 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 ARL5AQ9Y689 179 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 MAP1BP46821 2468 aaKnown RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 A6NHS1 94 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 C9JVG2 144 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 RGS5O15539 181 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 RNASEH1O60930 286 aaKnown RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 LSM3P62310 102 aaKnown RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 TSTD2Q5T7W7 516 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 CAND1Q86VP6 1230 aaKnown RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 ADCY4Q8NFM4 1077 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 MYO19Q96H55 970 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 SIGLEC10Q96LC7 697 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 ZFP14Q9HCL3 533 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 TRNAU1APQ9NX07 287 aaKnown RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 NDUFAF1Q9Y375 327 aa11.28□□□□□ -0.6
SMPD4-218ENST00000482171 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-218ENST00000482171 ZNF623O75123 536 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 TIPRLO75663 272 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 WASP42768 502 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 SLC1A2P43004 574 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 PRKAA2P54646 552 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 DPY19L2P1Q6NXN4 242 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 FAM126BQ8IXS8 530 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 DSELQ8IZU8 1212 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 FSTL5Q8N475 847 aaPredicted RBP11.27□□□□□ -0.6
SMPD4-218ENST00000482171 NKAPQ8N5F7 415 aaKnown RBP11.27□□□□□ -0.6
SMPD4-218ENST00000482171 RP9Q8TA86 221 aaKnown RBP11.27□□□□□ -0.6
SMPD4-218ENST00000482171 ELMO1Q92556 727 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 C9orf16Q9BUW7 83 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 OSBPL11Q9BXB4 747 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 FAM126AQ9BYI3 521 aaPredicted RBP11.27□□□□□ -0.6
SMPD4-218ENST00000482171 STN1Q9H668 368 aaKnown RBP11.27□□□□□ -0.6
SMPD4-218ENST00000482171 FKBPLQ9UIM3 349 aa11.27□□□□□ -0.6
SMPD4-218ENST00000482171 PRPF19Q9UMS4 504 aaKnown RBP11.27□□□□□ -0.6
SMPD4-218ENST00000482171 TRIM38O00635 465 aa11.27□□□□□ -0.61
SMPD4-218ENST00000482171 RPP40O75818 363 aaKnown RBP11.27□□□□□ -0.61
SMPD4-218ENST00000482171 GOT2P00505 430 aaKnown RBP11.27□□□□□ -0.61
SMPD4-218ENST00000482171 KRT6AP02538 564 aa11.27□□□□□ -0.61
SMPD4-218ENST00000482171 KRT6BP04259 564 aa11.27□□□□□ -0.61
SMPD4-218ENST00000482171 GALTP07902 379 aa11.27□□□□□ -0.61
SMPD4-218ENST00000482171 LINC00032P0C843 101 aa11.27□□□□□ -0.61
SMPD4-218ENST00000482171 HGFP14210 728 aa11.27□□□□□ -0.61
SMPD4-218ENST00000482171 GMPRP36959 345 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms