RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 RGS18Q9NS28 235 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 MRGBPQ9NV56 204 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TMLHEQ9NVH6 421 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 MIOSQ9NXC5 875 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 SELENONQ9NZV5 590 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 GBF1Q92538 1859 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 DOCK4Q8N1I0 1966 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 RBM47A0AV96 593 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 FUOMA2VDF0 154 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 J3KR12 359 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 OCM2P0CE71 109 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 OCMP0CE72 109 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 MTHFD2P13995 350 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 PRDX3P30048 256 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 MAGEA8P43361 318 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 ZFP36L2P47974 494 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 SERPINH1P50454 418 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 LIPEQ05469 1076 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 NFATC3Q12968 1075 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 BNIP2Q12982 314 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 NFYCQ13952 458 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 SEMA3AQ14563 771 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 LDLRAP1Q5SW96 308 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 ITIH5Q86UX2 942 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 LPPQ93052 612 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TSPAN17Q96FV3 270 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TMEM209Q96SK2 561 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 PRKD2Q9BZL6 878 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 FANCEQ9HB96 536 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 SEMA4BQ9NPR2 832 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 INTS7Q9NVH2 962 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 IKZF3Q9UKT9 509 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 BLOC1S6Q9UL45 172 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 COQ6Q9Y2Z9 468 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 CASTOR2A6NHX0 329 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 NR4A1P22736 598 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 HRH2P25021 359 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 RELAQ04206 551 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 RPS6KA2Q15349 733 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 KANK2Q63ZY3 851 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 FAM117BQ6P1L5 589 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 C16orf87Q6PH81 154 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TFAP2DQ7Z6R9 452 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 KIAA2013Q8IYS2 634 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 ZNF420Q8TAQ5 688 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 CASP10Q92851 521 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 SMARCD1Q96GM5 515 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 MUS81Q96NY9 551 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 KCTD14Q9BQ13 255 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 RTP3Q9BQQ7 232 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 TRMOQ9BU70 441 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 C1orf50Q9BV19 199 aa11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 NOL6Q9H6R4 1146 aaKnown RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 SDR39U1Q9NRG7 319 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-203ENST00000462146 BRCA2P51587 3418 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 COL4A4P53420 1690 aaPredicted RBP11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 IRAK2O43187 625 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 TCF3P15923 654 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 PORP16435 677 aaPredicted RBP11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 EEF1B2P24534 225 aaKnown RBP11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 UFM1P61960 85 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 ZNF33AQ06730 810 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 CD300CQ08708 224 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 SLC10A7Q0GE19 358 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 PRMT9Q6P2P2 845 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 USP51Q70EK9 711 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 BPIFB6Q8NFQ5 453 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 CALML6Q8TD86 181 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 TBATAQ96M53 351 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 CSF3RQ99062 836 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 PTPRDP23468 1912 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 ANKRD36A6QL64 1941 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 CXCL11O14625 94 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 PEX11BO96011 259 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 IGLV3-25P01717 112 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 MMP2P08253 660 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 PIRTP0C851 137 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 LBPP18428 481 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 CCR1P32246 355 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 ADARB1P78563 741 aaKnown RBP11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 SFSWAPQ12872 951 aaKnown RBP11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 PRAMEF19Q5SWL8 479 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 MANEALQ5VSG8 457 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 ANKRD13AQ8IZ07 590 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 DCP1BQ8IZD4 617 aaKnown RBP11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 DCBLD1Q8N8Z6 715 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 HASPINQ8TF76 798 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 GAD1Q99259 594 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 ANAPC2Q9UJX6 822 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 PCDHGA4Q9Y5G9 962 aa11.69□□□□□ -0.54
PDZRN3-203ENST00000462146 SMIM35A0A1B0GVV1 85 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 CBFA2T3O75081 653 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 CLASP2O75122 1294 aaKnown RBP11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 C1RP00736 705 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 GPIP06744 558 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 PCNAP12004 261 aa11.68□□□□□ -0.54
PDZRN3-203ENST00000462146 MAP4P27816 1152 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms