RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 C2CD4AQ8NCU7 369 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 MAFAQ8NHW3 353 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 SERAC1Q96JX3 654 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 GPR63Q9BZJ6 419 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 SUN2Q9UH99 717 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 STK38LQ9Y2H1 464 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 A0A1W2PQ67 120 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 UPK3BL1B0FP48 263 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 TRIM49D1C9J1S8 452 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 UPK3BL2E5RIL1 263 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 H7C0S8 307 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 PLK4O00444 970 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 KPNA3O00505 521 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 PRNPP04156 253 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 GLULP15104 373 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 GNAZP19086 355 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 CA5AP35218 305 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 GP5P40197 560 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 CDKN1CP49918 316 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 POLR2LP62875 67 aaKnown RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 ZP2Q05996 745 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 RALGDSQ12967 914 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 MPP2Q14168 576 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 MROH9Q5TGP6 573 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 ZNF470Q6ECI4 717 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 CILP2Q8IUL8 1156 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 MMAAQ8IVH4 418 aaKnown RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 SRRM1Q8IYB3 904 aaKnown RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 CBARPQ8N350 705 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-201ENST00000343575 OR6P1Q8NGX9 317 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 RBBP8Q99708 897 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 GABRG3Q99928 467 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 PITPNM3Q9BZ71 974 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 PCDH12Q9NPG4 1184 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 SENP1Q9P0U3 644 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 FBXO5Q9UKT4 447 aa14.65□□□□□ -0.06
CXCL12-201ENST00000343575 STX7O15400 261 aaKnown RBP14.64□□□□□ -0.07
CXCL12-201ENST00000343575 GPR39O43194 453 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 RFPL1O75677 317 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 HAUS5O94927 633 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 S1PR4O95977 384 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 ATP6V1C1P21283 382 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 DRD1P21728 446 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 ITGB7P26010 798 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 FOXN2P32314 431 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 PRAMEP78395 509 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 PFKPQ01813 784 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 CCINQ13939 588 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 USP45Q70EL2 814 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 TTC7BQ86TV6 843 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 ZC3HC1Q86WB0 502 aaKnown RBP14.64□□□□□ -0.07
CXCL12-201ENST00000343575 PIANPQ8IYJ0 282 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 ZNF687Q8N1G0 1237 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 PAF1Q8N7H5 531 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 GPR150Q8NGU9 434 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 OR4L1Q8NH43 312 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 MGARPQ8TDB4 240 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 KLF6Q99612 283 aaPredicted RBP14.64□□□□□ -0.07
CXCL12-201ENST00000343575 TUBB6Q9BUF5 446 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 DUSP12Q9UNI6 340 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 IKBKGQ9Y6K9 419 aa14.64□□□□□ -0.07
CXCL12-201ENST00000343575 IQANK1A0A1B0GTG1 560 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 A0A1W2PQF6 199 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 NPC1O15118 1278 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ALDOAP04075 364 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ITGA2BP08514 1039 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 SNRPAP09012 282 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 C1SP09871 688 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ACADSP16219 412 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 BPIP17213 487 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 KRT15P19012 456 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 COPAP53621 1224 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 LIMK2P53671 638 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 PDE1BQ01064 536 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 GRSF1Q12849 480 aaKnown RBP eCLIP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 THOC5Q13769 683 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 LRRC14Q15048 493 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ZRSR2Q15696 482 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 GRTP1Q5TC63 336 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ADHFE1Q8IWW8 467 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 KIRREL3Q8IZU9 778 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 KIF2BQ8N4N8 673 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ANKRD42Q8N9B4 389 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 GPR26Q8NDV2 337 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 SRPK1Q96SB4 655 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 C19orf43Q9BQ61 176 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 FAM167BQ9BTA0 163 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 RSPH9Q9H1X1 276 aaPredicted RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 IL26Q9NPH9 171 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ITM2BQ9Y287 266 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 MTO1Q9Y2Z2 717 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ZNF106Q9H2Y7 1883 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 ANKRD33BA6NCL7 494 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 FAM47DPA6NHR8 397 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 AREL1O15033 823 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 CD3EAPO15446 510 aaKnown RBP14.63□□□□□ -0.07
CXCL12-201ENST00000343575 IL1BP01584 269 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 GM2AP17900 193 aa14.63□□□□□ -0.07
CXCL12-201ENST00000343575 TAC1P20366 129 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms