RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 OR1A2Q9Y585 309 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 GOLGA6L10A0A0M3HER8 536 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 USP12O75317 370 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 CSO75390 466 aaKnown RBP15.67■□□□□ 0.1
USB1-208ENST00000563207 ALPPL2P10696 532 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 C6P13671 934 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 TSHRP16473 764 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 LIG3P49916 1009 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 THOP1P52888 689 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 RPL26P61254 145 aaKnown RBP15.67■□□□□ 0.1
USB1-208ENST00000563207 DSC2Q02487 901 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 PTPRRQ15256 657 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 FAXCQ5TGI0 409 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 ZCCHC8Q6NZY4 707 aaKnown RBP15.67■□□□□ 0.1
USB1-208ENST00000563207 B4GALNT4Q76KP1 1039 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 SFTPA2Q8IWL1 248 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 SLC35F3Q8IY50 421 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 NDUFAF2Q8N183 169 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 COG1Q8WTW3 980 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 C1orf54Q8WWF1 131 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 RTP4Q96DX8 246 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 NAF1Q96HR8 494 aaKnown RBP15.67■□□□□ 0.1
USB1-208ENST00000563207 FCRL5Q96RD9 977 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 FAM118BQ9BPY3 351 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 APOBEC3BQ9UH17 382 aaKnown RBP15.67■□□□□ 0.1
USB1-208ENST00000563207 PHTF1Q9UMS5 762 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 RPL26L1Q9UNX3 145 aaKnown RBP15.67■□□□□ 0.1
USB1-208ENST00000563207 ZNF148Q9UQR1 794 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 CSNK1G3Q9Y6M4 447 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 RP1P56715 2156 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 KIF26BQ2KJY2 2108 aa15.67■□□□□ 0.1
USB1-208ENST00000563207 H3BM21 787 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 RIOK3O14730 519 aaKnown RBP15.66■□□□□ 0.1
USB1-208ENST00000563207 YY2O15391 372 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 GM2AP17900 193 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 XPAP23025 273 aaPredicted RBP15.66■□□□□ 0.1
USB1-208ENST00000563207 ACTN2P35609 894 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 ABCG1P45844 678 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 NIPAL4Q0D2K0 466 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 ELP6Q0PNE2 266 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 RALGDSQ12967 914 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 INPP5AQ14642 412 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 LRRC14Q15048 493 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 ALG11Q2TAA5 492 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 P3H1Q32P28 736 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 ANKRD20A2Q5SQ80 823 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 ARMC12Q5T9G4 340 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 ANKRD20A1Q5TYW2 823 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 ANKRD20A3Q5VUR7 823 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 C4orf22Q6V702 233 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 RD3Q7Z3Z2 195 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 CACTIN-AS1Q8N1I8 211 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 PELI3Q8N2H9 469 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 PAF1Q8N7H5 531 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 MAPK15Q8TD08 544 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 TADA1Q96BN2 335 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 MS4A14Q96JA4 679 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 SPATA13Q96N96 652 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 TMEM121Q9BTD3 319 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 DUSP23Q9BVJ7 150 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 BOCQ9BWV1 1114 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 CEP41Q9BYV8 373 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 GBA3Q9H227 469 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 FEZ2Q9UHY8 353 aaPredicted RBP15.66■□□□□ 0.1
USB1-208ENST00000563207 PCDHGC4Q9Y5F7 938 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 MGAQ8IWI9 3026 aa15.66■□□□□ 0.1
USB1-208ENST00000563207 EME2A4GXA9 379 aaPredicted RBP15.65■□□□□ 0.1
USB1-208ENST00000563207 GOLGA6CA6NDK9 693 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 GOLGA6BA6NDN3 693 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 FZD6O60353 706 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 ANXA9O76027 345 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 PGLSO95336 258 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 PRB1P04280 392 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 PCCBP05166 539 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 MMP2P08253 660 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 GOLGA6DP0CG33 693 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 CD68P34810 354 aaPredicted RBP15.65■□□□□ 0.1
USB1-208ENST00000563207 MMP12P39900 470 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 CD86P42081 329 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 PAFAH1B1P43034 410 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 GABREP78334 506 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 SKOR1P84550 965 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 MPP3Q13368 585 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 PRPSAP1Q14558 356 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 CYP1B1Q16678 543 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 ERAP2Q6P179 960 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 SYT10Q6XYQ8 523 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 MACC1Q6ZN28 852 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 HID1Q8IV36 788 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 PRELID2Q8N945 189 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 FAM71DQ8N9W8 422 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 SNIP1Q8TAD8 396 aaKnown RBP15.65■□□□□ 0.1
USB1-208ENST00000563207 ATG4AQ8WYN0 398 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 FGF11Q92914 225 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 LRRC45Q96CN5 670 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 ATXN7L3BQ96GX2 97 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 TDRD1Q9BXT4 1180 aaKnown RBP15.65■□□□□ 0.1
USB1-208ENST00000563207 ADGRE3Q9BY15 652 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 ABCG4Q9H172 646 aa15.65■□□□□ 0.1
USB1-208ENST00000563207 PRORYQ9H606 182 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms