RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 NFKBIL1Q9UBC1 381 aaPredicted RBP15.46■□□□□ 0.07
RABGGTA-219ENST00000560871 CD84Q9UIB8 345 aa15.46■□□□□ 0.07
RABGGTA-219ENST00000560871 KLF15Q9UIH9 416 aa15.46■□□□□ 0.07
RABGGTA-219ENST00000560871 SHOC2Q9UQ13 582 aa15.46■□□□□ 0.07
RABGGTA-219ENST00000560871 ZNF148Q9UQR1 794 aa15.46■□□□□ 0.07
RABGGTA-219ENST00000560871 KNL1Q8NG31 2342 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 RGSL1A5PLK6 1076 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 PGRMC1O00264 195 aaKnown RBP15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 AURKAO14965 403 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 PIAS2O75928 621 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 DKK1O94907 266 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 THOP1P52888 689 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 GNG11P61952 73 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 HENMT1Q5T8I9 393 aaKnown RBP15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 FAXCQ5TGI0 409 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 CCDC70Q6NSX1 233 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 NYAP1Q6ZVC0 841 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 PRUNE1Q86TP1 453 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 GATAD2AQ86YP4 633 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 TTC30BQ8N4P2 665 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 SLC25A41Q8N5S1 370 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 ACTRT1Q8TDG2 376 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 SCAMP4Q969E2 229 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 AP2M1Q96CW1 435 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 SRPK1Q96SB4 655 aaKnown RBP15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 AGAP2Q99490 1192 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 LGR4Q9BXB1 951 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 TEX101Q9BY14 249 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 WDR26Q9H7D7 661 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 SMARCAL1Q9NZC9 954 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 PKD2L2Q9NZM6 624 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 DRG1Q9Y295 367 aaKnown RBP15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 KMT2BQ9UMN6 2715 aaPredicted RBP15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 CABIN1Q9Y6J0 2220 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 LRP4O75096 1905 aa15.45■□□□□ 0.06
RABGGTA-219ENST00000560871 TNFSF14O43557 240 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 SDC3O75056 442 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 USP12O75317 370 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 AP2A1O95782 977 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 AGTP01019 485 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 IFNB1P01574 187 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 MYCLP1P12525 358 aaPredicted RBP15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 ETS1P14921 441 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 TNNT3P45378 269 aaPredicted RBP15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 KCNJ1P48048 391 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 DCDC1P59894 354 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 CDK3Q00526 305 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 MSLNQ13421 630 aaPredicted RBP15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 CYP1B1Q16678 543 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 ZNF542PQ5EBM4 170 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 PAPD7Q5XG87 772 aaKnown RBP15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 KCTD16Q68DU8 428 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 RAET1GQ6H3X3 334 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 DENND5AQ6IQ26 1287 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 HEATR4Q86WZ0 1026 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 RBFAQ8N0V3 343 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 C17orf53Q8N3J3 647 aaPredicted RBP15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 CCHCR1Q8TD31 782 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 WDR92Q96MX6 357 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 TBL1YQ9BQ87 522 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 TRABDQ9H4I3 376 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 DNAJC28Q9NX36 388 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 HACD3Q9P035 362 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 ACACBO00763 2458 aa15.44■□□□□ 0.06
RABGGTA-219ENST00000560871 TMEM202A6NGA9 273 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 CACNB4O00305 520 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 ZNF185O15231 689 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 SLC4A1P02730 911 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 GIMD1P0DJR0 217 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 TCP1P17987 556 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 DGKAP23743 735 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 HMGCLP35914 325 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 GPR1P46091 355 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 HNRNPKP61978 463 aaKnown RBP eCLIP15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 SEMA5AQ13591 1074 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 ALG11Q2TAA5 492 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 INAVAQ3KP66 663 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 TTC27Q6P3X3 843 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 ADAMTSL4Q6UY14 1074 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 PHACTR4Q8IZ21 702 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 SLC25A45Q8N413 288 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 KDF1Q8NAX2 398 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 GPR26Q8NDV2 337 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 ZNF548Q8NEK5 533 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 BLOC1S5Q8TDH9 187 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 PDXPQ96GD0 296 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 COX14Q96I36 57 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 TBATAQ96M53 351 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 APOL2Q9BQE5 337 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 RIOK2Q9BVS4 552 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 GPR63Q9BZJ6 419 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 TCEAL2Q9H3H9 227 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 LRRC40Q9H9A6 602 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 ARNT2Q9HBZ2 717 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 FGF22Q9HCT0 170 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 HOMER3Q9NSC5 361 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 UCKL1Q9NWZ5 548 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 PAK5Q9P286 719 aa15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 APOBEC3BQ9UH17 382 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-219ENST00000560871 SPEGQ15772 3267 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms