RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 CCDC110Q8TBZ0 833 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 CCHCR1Q8TD31 782 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 MRGPRX2Q96LB1 330 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 APOLD1Q96LR9 279 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 TBATAQ96M53 351 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 AGAP2Q99490 1192 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 RIOK2Q9BVS4 552 aaKnown RBP11.79□□□□□ -0.52
RAB5C-204ENST00000547517 FSD1LQ9BXM9 530 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 TEX101Q9BY14 249 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 ZFYVE1Q9HBF4 777 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 PKD2L2Q9NZM6 624 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 DOLKQ9UPQ8 538 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 R3HDM2Q9Y2K5 976 aaKnown RBP11.79□□□□□ -0.52
RAB5C-204ENST00000547517 CSNK1G3Q9Y6M4 447 aa11.79□□□□□ -0.52
RAB5C-204ENST00000547517 PRSS38A1L453 326 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 LMO7DNF2Z398 122 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 PDE2AO00408 941 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-204ENST00000547517 INPP4BO15327 924 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 TNFP01375 233 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 HOXC4P09017 264 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-204ENST00000547517 PSMB4P28070 264 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 TEAD1P28347 426 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 SPINT3P49223 89 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 CLDN6P56747 220 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 MPP3Q13368 585 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 ELOCQ15369 112 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 RPS6KA1Q15418 735 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 SIRPB2Q5JXA9 342 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 ANKRD20A2Q5SQ80 823 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 MEI1Q5TIA1 1274 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 ANKRD20A1Q5TYW2 823 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 ANKRD20A3Q5VUR7 823 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 ADAMTSL4Q6UY14 1074 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 NRSN1Q8IZ57 195 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 FSTL5Q8N475 847 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-204ENST00000547517 ATG4AQ8WYN0 398 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 SPATA13Q96N96 652 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 GORASP1Q9BQQ3 440 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 FICDQ9BVA6 458 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 FRMD8Q9BZ67 464 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-204ENST00000547517 GPR63Q9BZJ6 419 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 CARS2Q9HA77 564 aaKnown RBP11.78□□□□□ -0.52
RAB5C-204ENST00000547517 MAGEE1Q9HCI5 957 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 CYP4F12Q9HCS2 524 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 SIRPGQ9P1W8 387 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 NEUROG3Q9Y4Z2 214 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 PCDHGA1Q9Y5H4 931 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 SPO11Q9Y5K1 396 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 DGKBQ9Y6T7 804 aa11.78□□□□□ -0.52
RAB5C-204ENST00000547517 LY6G6EA0A0G2JKS1 128 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 LOC285095A0A1B0GVY8 99 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 TPP1O14773 563 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 TNFRSF10CO14798 259 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 AURKAO14965 403 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 YY2O15391 372 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 ZNF189O75820 626 aaPredicted RBP11.77□□□□□ -0.53
RAB5C-204ENST00000547517 ANXA9O76027 345 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 PYGLP06737 847 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 CKMT1AP12532 417 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 ACP1P24666 158 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 GNPDA1P46926 289 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 POLD2P49005 469 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 GEMP55040 296 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 PRPSAP1Q14558 356 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 NR0B2Q15466 257 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 SLC1A5Q15758 541 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 C6orf132Q5T0Z8 1188 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 HENMT1Q5T8I9 393 aaKnown RBP11.77□□□□□ -0.53
RAB5C-204ENST00000547517 FAM71DQ8N9W8 422 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 FAM181AQ8N9Y4 354 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 TRIM58Q8NG06 486 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.53
RAB5C-204ENST00000547517 ANP32BQ92688 251 aaKnown RBP11.77□□□□□ -0.53
RAB5C-204ENST00000547517 EID2BQ96D98 161 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 CNTNAP3BQ96NU0 1288 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 WDR24Q96S15 920 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 CNTNAP3Q9BZ76 1288 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 TMEM168Q9H0V1 697 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 FAM83DQ9H4H8 585 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 USP29Q9HBJ7 922 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 EVA1BQ9NVM1 165 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 U3KQA8 63 aa11.77□□□□□ -0.53
RAB5C-204ENST00000547517 ARID1BQ8NFD5 2236 aaPredicted RBP11.76□□□□□ -0.53
RAB5C-204ENST00000547517 FAM149AA5PLN7 773 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 FADS2P1A8MWK0 482 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 FGF1P05230 155 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 CEACAM5P06731 702 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 HLA-DPA1P20036 260 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 GDF10P55107 478 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 ILKQ13418 452 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 OLIG2Q13516 323 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 ZNF569Q5MCW4 686 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 HES3Q5TGS1 186 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 GUSBP11Q6P575 273 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 ARHGEF18Q6ZSZ5 1173 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 MARK2Q7KZI7 788 aaKnown RBP11.76□□□□□ -0.53
RAB5C-204ENST00000547517 GLT6D1Q7Z4J2 308 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 TMC3Q7Z5M5 1100 aa11.76□□□□□ -0.53
RAB5C-204ENST00000547517 TAF8Q7Z7C8 310 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms