RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RIPOR3Q96MK2 946 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 SH3GL2Q99962 352 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 CLSTN3Q9BQT9 956 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 HAUS8Q9BT25 410 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 NAA15Q9BXJ9 866 aaKnown RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 CTDSP1Q9GZU7 261 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 PLEKHA4Q9H4M7 779 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TTC12Q9H892 705 aaPredicted RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 PLEKHA2Q9HB19 425 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 ZBTB20Q9HC78 741 aaPredicted RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 HDAC6Q9UBN7 1215 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TCEAL9Q9UHQ7 104 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 KCND3Q9UK17 655 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TTC7AQ9ULT0 858 aaPredicted RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 KCNJ14Q9UNX9 436 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 JRKLQ9Y4A0 524 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 A3GALT2U3KPV4 340 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 ZNF646O15015 1829 aaPredicted RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 PTPRCP08575 1304 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 STK36Q9NRP7 1315 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 ZCWPW2A0A1B0GU75 182 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 C1orf226A1L170 272 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 SH2D7A6NKC9 451 aaPredicted RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 HSPB2A8KAH6 182 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 TSPAN6O43657 245 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 KLK8O60259 260 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 SKAP2O75563 359 aaPredicted RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 ACTL6BO94805 426 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 TNFRSF6BO95407 300 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 TSHBP01222 138 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 PRB2P02812 416 aaPredicted RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 NR3C1P04150 777 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 CHRM4P08173 479 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 HMBSP08397 361 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 FAM106CPP0CH98 169 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 SLC2A4P14672 509 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 CAPN2P17655 700 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 CEBPBP17676 345 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 CD72P21854 359 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 ZBTB25P24278 435 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 AHRP35869 848 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 SLC6A12P48065 614 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 BLKP51451 505 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 RBM5P52756 815 aaKnown RBP eCLIP0.73□□□□□ -2.29
COPB1-212ENST00000534771 SNRPD1P62314 119 aaKnown RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 MS4A2Q01362 244 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 PDCLQ13371 301 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 EIF4EBP2Q13542 120 aaPredicted RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 HSPB2Q16082 182 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 CTU2Q2VPK5 515 aaKnown RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 MMEL1Q495T6 779 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 GLIPR1L2Q4G1C9 344 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 FASTKD1Q53R41 847 aaKnown RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 TAF1BQ53T94 588 aaPredicted RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 ANKRD54Q6NXT1 300 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 METTL2BQ6P1Q9 378 aaKnown RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 KCTD18Q6PI47 426 aaPredicted RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 PAQR6Q6TCH4 344 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 KLHL17Q6TDP4 642 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 MFSD6Q6ZSS7 791 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 SH2D5Q6ZV89 423 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 Q6ZVH6 145 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 PLEKHM3Q6ZWE6 761 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 MTSS1LQ765P7 747 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 RRAGAQ7L523 313 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 SYT13Q7L8C5 426 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 RASGRP2Q7LDG7 609 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 CPXM2Q8N436 756 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 OR2C3Q8N628 320 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 RASL10AQ92737 203 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 KIAA1191Q96A73 305 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 METTL2AQ96IZ6 378 aaKnown RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 LINC00167Q96N53 147 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 NEUROD6Q96NK8 337 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 QRFPRQ96P65 431 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 TRAPPC9Q96Q05 1148 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 PCYT2Q99447 389 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 MPHOSPH8Q99549 860 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 HERC2P3Q9BVR0 1158 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 SLC25A18Q9H1K4 315 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 KCNN2Q9H2S1 579 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 PABPC3Q9H361 631 aaKnown RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 MKKSQ9NPJ1 570 aaPredicted RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 TLR8Q9NR97 1041 aaKnown RBP0.73□□□□□ -2.29
COPB1-212ENST00000534771 ABCB10Q9NRK6 738 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 TCP11L1Q9NUJ3 509 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 PLCXD1Q9NUJ7 323 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 TMEM181Q9P2C4 612 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 ACAD8Q9UKU7 415 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 FAM50BQ9Y247 325 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 NTNG1Q9Y2I2 539 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 PCDHGB2Q9Y5G2 931 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 EID1Q9Y6B2 187 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 STON1Q9Y6Q2 735 aa0.73□□□□□ -2.29
COPB1-212ENST00000534771 PRAG1Q86YV5 1406 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 ASTN2O75129 1339 aaPredicted RBP0.72□□□□□ -2.29
COPB1-212ENST00000534771 TAF1P21675 1872 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 A0A1W2PPI3 338 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 GOLGA6L3A6NEY3 463 aa0.72□□□□□ -2.29
COPB1-212ENST00000534771 TMEM202A6NGA9 273 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms