RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 FAM110CQ1W6H9 321 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 SHROOM1Q2M3G4 852 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 TWISTNBQ3B726 338 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 FBXO43Q4G163 708 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 CAVIN4Q5BKX8 364 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ABLIM2Q6H8Q1 611 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ERAP2Q6P179 960 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 TMEM154Q6P9G4 183 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 C6orf89Q6UWU4 347 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 RANBP10Q6VN20 620 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF600Q6ZNG1 722 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 MRPL10Q7Z7H8 261 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 PATL1Q86TB9 770 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 RASGRP3Q8IV61 690 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 SYTL1Q8IYJ3 562 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 CACNA2D3Q8IZS8 1091 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 TTC5Q8N0Z6 440 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 VPS52Q8N1B4 723 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 GALNT16Q8N428 558 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 LINC01465Q8N7H1 131 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 PPFIBP2Q8ND30 876 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 MAFAQ8NHW3 353 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF473Q8WTR7 871 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ABTB1Q969K4 478 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ATP6V1E2Q96A05 226 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 SGK3Q96BR1 496 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 MAELQ96JY0 434 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ARL5BQ96KC2 179 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ART5Q96L15 291 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 TBATAQ96M53 351 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 NLRP4Q96MN2 994 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 GAL3ST1Q99999 423 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 GPATCH1Q9BRR8 931 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 MRPL1Q9BYD6 325 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 DBNDD1Q9H9R9 158 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 PLCB1Q9NQ66 1216 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 SH3GLB2Q9NR46 395 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ABCF3Q9NUQ8 709 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 THAP1Q9NVV9 213 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 PTTG2Q9NZH5 202 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 DBF4Q9UBU7 674 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 TSPYL4Q9UJ04 414 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 DDX19BQ9UMR2 479 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 RPL26L1Q9UNX3 145 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 LRCH1Q9Y2L9 728 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF804BA4D1E1 1349 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 OVOS2A0A0G2JMS6 1433 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 GOLGA8IPA6NC78 632 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 USP27XA6NNY8 438 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 KIF28PB7ZC32 967 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 TISP43B9A030 160 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 F8W810 466 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 CLIC1O00299 241 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 HNRNPRO43390 633 aaKnown RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 NCK2O43639 380 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 SERPINB7O75635 380 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 KRT75O95678 551 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 OXSR1O95747 527 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 DDX58O95786 925 aaKnown RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 KRT7P08729 469 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 CD63P08962 238 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 CHRNB1P11230 501 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 CYP2A6P11509 494 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 APEHP13798 732 aaKnown RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 PRKACAP17612 351 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 DUSP1P28562 367 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 PSMC2P35998 433 aaKnown RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 MTHFRP42898 656 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 NOP14P78316 857 aaKnown RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 GBE1Q04446 702 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 GOLGA8FQ08AF8 430 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 GOLGA8DPQ0D2H9 430 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 STK4Q13043 487 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 SEMA3BQ13214 749 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 DNASE1L3Q13609 305 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 PMS2P11Q13670 270 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 PDE1CQ14123 709 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 KCNJ12Q14500 433 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 TSC22D1Q15714 1073 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 LETM2Q2VYF4 491 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 GRAMD1BQ3KR37 738 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 HSP90AA5PQ58FG0 334 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 PPP6R3Q5H9R7 873 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 FAM122CQ6P4D5 195 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 FAM173BQ6P4H8 233 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 KDM7AQ6ZMT4 941 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 KIAA0408Q6ZU52 694 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 GALNT7Q86SF2 657 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 NEK8Q86SG6 692 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 SPATA2LQ8IUW3 424 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 IFT20Q8IY31 132 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 ST13P4Q8IZP2 240 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 FAM9CQ8IZT9 166 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 C8orf58Q8NAV2 365 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 XXYLT1Q8NBI6 393 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 PRSS3P2Q8NHM4 247 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 ENKURQ8TC29 256 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 FNDC8Q8TC99 324 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 SLC22A8Q8TCC7 542 aa4.73□□□□□ -1.65
HMGB3P13-201ENST00000511263 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms