RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ARSFP54793 590 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 DNAJB13P59910 316 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 VBP1P61758 197 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 TUBA3CQ13748 450 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 PAFAH1B3Q15102 231 aaKnown RBP13.94□□□□□ -0.18
VPS52-212ENST00000445902 CTF1Q16619 201 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 SLC25A52Q3SY17 297 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 ATAD3BQ5T9A4 648 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 STRADAQ7RTN6 431 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 SULF1Q8IWU6 871 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 LGI2Q8N0V4 545 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 SCML4Q8N228 414 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 MIER2Q8N344 545 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 BIRC7Q96CA5 298 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 CGREF1Q99674 301 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 YTHDF1Q9BYJ9 559 aaKnown RBP13.94□□□□□ -0.18
VPS52-212ENST00000445902 TOR3AQ9H497 397 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 DNAJC15Q9Y5T4 150 aa13.94□□□□□ -0.18
VPS52-212ENST00000445902 M0R3G1 203 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 SIX3O95343 332 aaPredicted RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 ALOX5P09917 674 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 LINC00032P0C843 101 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 CHRNA4P43681 627 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 DIO3P55073 304 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 TPI1P60174 286 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 TSPY1Q01534 308 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 IFITM2Q01629 132 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 UGP2Q16851 508 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 THAP5Q7Z6K1 395 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 LDB1Q86U70 411 aaPredicted RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 RALGPS2Q86X27 583 aaPredicted RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 ZDHHC17Q8IUH5 632 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 MINDY1Q8N5J2 469 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 SLC2A14Q8TDB8 520 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 TMBIM1Q969X1 311 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 TMEM125Q96AQ2 219 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 TUBGCP3Q96CW5 907 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 ZMAT2Q96NC0 199 aaKnown RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 ABCB10Q9NRK6 738 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 NSMCE4AQ9NXX6 385 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 PGAP2Q9UHJ9 254 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 ENPP5Q9UJA9 477 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 I6L893 689 aaPredicted RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 C7P10643 843 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 THRBP10828 461 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 TGFBR1P36897 503 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 SEPHS1P49903 392 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 GP2P55259 537 aaKnown RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 ECT2LQ008S8 904 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 BST2Q10589 180 aaKnown RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 CTU2Q2VPK5 515 aaKnown RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 NOMO2Q5JPE7 1267 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 HABP4Q5JVS0 413 aaKnown RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 CATSPEREQ5SY80 951 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 HFE2Q6ZVN8 426 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 CTU1Q7Z7A3 348 aaKnown RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 TBC1D21Q8IYX1 336 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 C8orf59Q8N0T1 100 aaPredicted RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 OR7A2PQ8NGA2 310 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 SH3RF2Q8TEC5 729 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 SEPT1Q8WYJ6 367 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 HDAC11Q96DB2 347 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 TEX37Q96LM6 180 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 FDXACB1Q9BRP7 624 aaPredicted RBP13.93□□□□□ -0.18
VPS52-212ENST00000445902 KIFC1Q9BW19 673 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 MARCH7Q9H992 704 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 PCDHA9Q9Y5H5 950 aa13.93□□□□□ -0.18
VPS52-212ENST00000445902 UGT2B11O75310 529 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 HGFP14210 728 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 SERPINB1P30740 379 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 PIGAP37287 484 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 SNX16P57768 344 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 SH3BP2P78314 561 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 PLIN5Q00G26 463 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 PAGE3Q5JUK9 113 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 UGT3A1Q6NUS8 523 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 PKN3Q6P5Z2 889 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 ADCK1Q86TW2 530 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 KIAA2013Q8IYS2 634 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 MFSD4AQ8N468 514 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 EFHD2Q96C19 240 aaPredicted RBP13.92□□□□□ -0.18
VPS52-212ENST00000445902 NTN4Q9HB63 628 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 SPC25Q9HBM1 224 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 GMIPQ9P107 970 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 RCOR3Q9P2K3 495 aaPredicted RBP13.92□□□□□ -0.18
VPS52-212ENST00000445902 AASSQ9UDR5 926 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 SLCO3A1Q9UIG8 710 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 PNMA8BQ9ULN7 279 aaPredicted RBP13.92□□□□□ -0.18
VPS52-212ENST00000445902 PDE10AQ9Y233 779 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 BBIP1A8MTZ0 92 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 CCL22O00626 93 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 UGT2B4P06133 528 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 OR4D2P58180 307 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 LAPTM5Q13571 262 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 DGCR6Q14129 220 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 SKIV2LQ15477 1246 aaKnown RBP13.92□□□□□ -0.18
VPS52-212ENST00000445902 ADPRMQ3LIE5 342 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 NAPEPLDQ6IQ20 393 aa13.92□□□□□ -0.18
VPS52-212ENST00000445902 PRMT9Q6P2P2 845 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms