RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PRSS56P0CW18 603 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 CCL5P13501 91 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 PKMP14618 531 aaKnown RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 RAG1P15918 1043 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 TSPAN8P19075 237 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 MZF1P28698 734 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 CA8P35219 290 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 CSKP41240 450 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 TTPAP49638 278 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 VEGFBP49765 207 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 ATP4BP51164 291 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 APLP1P51693 650 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 NAA20P61599 178 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 MRPS35P82673 323 aaKnown RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 TLE2Q04725 743 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 KLC1Q07866 573 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 STX5Q13190 355 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 CDH18Q13634 790 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 OR4D1Q15615 310 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 PTPRNQ16849 979 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 AGKQ53H12 422 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 AARS2Q5JTZ9 985 aaKnown RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 ANO7Q6IWH7 933 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 FAM117BQ6P1L5 589 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 IZUMO2Q6UXV1 221 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 LINGO4Q6UY18 593 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 CHSY3Q70JA7 882 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 TAS2R42Q7RTR8 314 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 DNAJB7Q7Z6W7 309 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 CLYBLQ8N0X4 340 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 STAG3L4Q8TBR4 150 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 LPGAT1Q92604 370 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 USP13Q92995 863 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 KIAA1191Q96A73 305 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 FAM136AQ96C01 138 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 TMA16Q96EY4 203 aaKnown RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 NSMCE3Q96MG7 304 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 ATOH8Q96SQ7 321 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 CDRT15Q96T59 188 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 GPR21Q99679 349 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 NPAS2Q99743 824 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 ECSITQ9BQ95 431 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 MRPL1Q9BYD6 325 aaKnown RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 DERL2Q9GZP9 239 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 MID1IP1Q9NPA3 183 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 MRPL40Q9NQ50 206 aaKnown RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 MRPL17Q9NRX2 175 aaKnown RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 SPG21Q9NZD8 308 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 STK39Q9UEW8 545 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 TRMT6Q9UJA5 497 aaKnown RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 TMCO1Q9UM00 188 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 MTF2Q9Y483 593 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 INSL5Q9Y5Q6 135 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 HELZP42694 1942 aaKnown RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 ZNF106Q9H2Y7 1883 aaKnown RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 LCHNA4D1U4 455 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 NPEPPSL1A6NEC2 478 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 ANKRD66B4E2M5 251 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 PSMD12O00232 456 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 TRIM38O00635 465 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 AZIN1O14977 448 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 F11P03951 625 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 ME2P23368 584 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 PSMA3P25788 255 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 EEF1DP29692 281 aaKnown RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 RFC2P35250 354 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 KCNC1P48547 511 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 PKNOX1P55347 436 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 C1QTNF8P60827 252 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 TIAL1Q01085 375 aaKnown RBP eCLIP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 FLOT2Q14254 428 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 PFKFB4Q16877 469 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 PABPC1LQ4VXU2 614 aaKnown RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 INO80DQ53TQ3 878 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 ANKS6Q68DC2 871 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 REP15Q6BDI9 236 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 CLEC6AQ6EIG7 209 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 UGT3A1Q6NUS8 523 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 PAQR3Q6TCH7 311 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 DDX53Q86TM3 631 aaKnown RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 CMTR2Q8IYT2 770 aaKnown RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 TTC30BQ8N4P2 665 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 DCAF4L2Q8NA75 395 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 MICAL1Q8TDZ2 1067 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 SH3RF2Q8TEC5 729 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 C19orf60Q96EN9 201 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 MYO19Q96H55 970 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 TOX2Q96NM4 488 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 GPR63Q9BZJ6 419 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 VCXQ9H320 206 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 ZNF334Q9HCZ1 680 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 BPIFA1Q9NP55 256 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 TNFRSF12AQ9NP84 129 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 UTP6Q9NYH9 597 aaKnown RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 STOML2Q9UJZ1 356 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 PACSIN3Q9UKS6 424 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 FAM50BQ9Y247 325 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 ATP11BQ9Y2G3 1177 aa10.39□□□□□ -0.75
CPNE1-218ENST00000439806 FNDC3AQ9Y2H6 1198 aaKnown RBP10.39□□□□□ -0.75
CPNE1-218ENST00000439806 FCF1Q9Y324 198 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms