RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 SRSF6Q13247 344 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 SQSTM1Q13501 440 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 C16orf72Q14CZ0 275 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 TGIF1Q15583 401 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 LRRC66Q68CR7 880 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 USP45Q70EL2 814 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 DTX1Q86Y01 620 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 KIAA1524Q8TCG1 905 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 SCAMP4Q969E2 229 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 TMEM159Q96B96 161 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 IQCDQ96DY2 449 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 LYSMD1Q96S90 227 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CCNL2Q96S94 520 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 ZNF670Q9BS34 389 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 TDRD1Q9BXT4 1180 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 B3GNT4Q9C0J1 378 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 AMACRQ9UHK6 382 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 LOXL2Q9Y4K0 774 aa14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PCYT1BQ9Y5K3 369 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-203ENST00000437813 SYCE3A1L190 88 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CAPN8A6NHC0 703 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 C9orf172C9J069 976 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 MYO1FO00160 1098 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PPM1DO15297 605 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PROSCO94903 275 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 ECEL1O95672 775 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CPNE6O95741 557 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 MMP2P08253 660 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 ZNF30P17039 623 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CCNCP24863 283 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CD1CP29017 333 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 UBASH3AP57075 661 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 NIPAL4Q0D2K0 466 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 ILF3Q12906 894 aaKnown RBP eCLIP14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CLPPQ16740 277 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PYCR3Q53H96 274 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 ANKRD20A8PQ5CZ79 823 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 KIAA1614Q5VZ46 1190 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 DENND2CQ68D51 928 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 RAVER1Q8IY67 606 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 BBS5Q8N3I7 341 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 ZDHHC1Q8WTX9 485 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 AGAP2Q99490 1192 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 NUDT22Q9BRQ3 303 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 GSDMCQ9BYG8 508 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 POLR1EQ9GZS1 481 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 RDH14Q9HBH5 336 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 FOXJ2Q9P0K8 574 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CNOT6Q9ULM6 557 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PLEKHM1Q9Y4G2 1056 aa14.35□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PRAMEF33A0A0G2JMD5 474 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PRAMEF10O60809 474 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 MAP3K6O95382 1288 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 HLA-DQB2P05538 268 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 WT1P19544 449 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CSF2RBP32927 897 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 GPR3P46089 330 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 GNPDA1P46926 289 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 OR1D5P58170 312 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 GBE1Q04446 702 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 ARHGEF7Q14155 803 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 LY6DQ14210 128 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PDK2Q15119 407 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CCDC122Q5T0U0 273 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 RAET1GQ6H3X3 334 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CCDC81Q6ZN84 652 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 TRIM74Q86UV6 250 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CNTD1Q8N815 330 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 ZNF564Q8TBZ8 553 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CPLX3Q8WVH0 158 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 HDAC11Q96DB2 347 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PACSIN1Q9BY11 444 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 PISDQ9UG56 409 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 CD84Q9UIB8 345 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 MOSPD1Q9UJG1 213 aa14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 LUC7L2Q9Y383 392 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-203ENST00000437813 IGHV1OR21-1A0A087WYE8 117 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 IGHV5-10-1A0A0J9YXX1 117 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 C3orf70A6NLC5 250 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 DNAJC6O75061 913 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 EML2O95834 649 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 LIPCP11150 499 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 CES1P23141 567 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 NFKBIAP25963 317 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 CASP14P31944 242 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 MAN1A1P33908 653 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 FASLGP48023 281 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 RPL26P61254 145 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 KRT81Q14533 505 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 IFI16Q16666 785 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 LINC00303Q3SY05 128 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 TAF1BQ53T94 588 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 SLC30A9Q6PML9 568 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 PAF1Q8N7H5 531 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 PLD5Q8N7P1 536 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 LRRN4Q8WUT4 740 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 NSMCE1Q8WV22 266 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 AP2M1Q96CW1 435 aa14.33□□□□□ -0.12
TNFRSF1A-203ENST00000437813 EID2BQ96D98 161 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms