RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 ARCN1P48444 511 aaKnown RBP16.71■□□□□ 0.27
SIPA1-201ENST00000394224 BMXP51813 675 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 KCNK10P57789 538 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 NAB1Q13506 487 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 MEP1AQ16819 746 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 TECRLQ5HYJ1 363 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 CYS1Q717R9 158 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 LINC00523Q86TU6 105 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 ZNF598Q86UK7 904 aaKnown RBP16.71■□□□□ 0.27
SIPA1-201ENST00000394224 BEGAINQ9BUH8 593 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 KIFC1Q9BW19 673 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 TRHDEQ9UKU6 1024 aa16.71■□□□□ 0.27
SIPA1-201ENST00000394224 ANXA9O76027 345 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 DIRAS1O95057 198 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 VARSP26640 1264 aaKnown RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 GRK4P32298 578 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 GSK3BP49841 420 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 MAPRE2Q15555 327 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 SPESP1Q6UW49 350 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 TTC39CQ8N584 583 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 HMCESQ96FZ2 354 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 CHID1Q9BWS9 393 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 AFF4Q9UHB7 1163 aaKnown RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 SLC8A2Q9UPR5 921 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 CLASP2O75122 1294 aaKnown RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 H2AFYO75367 372 aaKnown RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 PENKP01210 267 aaPredicted RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 OR4D2P58180 307 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 GALNT2Q10471 571 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 TIGD5Q53EQ6 642 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 ALFQ53S48 1182 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 PAQR3Q6TCH7 311 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 CYHR1Q6ZMK1 362 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 TFAP2CQ92754 450 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 LRRC58Q96CX6 371 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 CCDC68Q9H2F9 335 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 MARCH7Q9H992 704 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 IFT80Q9P2H3 777 aaPredicted RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 ANKRD6Q9Y2G4 727 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 COQ6Q9Y2Z9 468 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 ARID2Q68CP9 1835 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 NRCAMQ92823 1304 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 NPEPPSL1A6NEC2 478 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 TARM1B6A8C7 271 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 SYNCRIPO60506 623 aaKnown RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 CNPP09543 421 aaKnown RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 SERPINH1P50454 418 aaKnown RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 UNC50Q53HI1 259 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 RAP1GAP2Q684P5 730 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 SMYD5Q6GMV2 418 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 GPR180Q86V85 440 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 FAM86B1Q8N7N1 296 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 SMYD1Q8NB12 490 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 AURKBQ96GD4 344 aaPredicted RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 PLEKHA8Q96JA3 519 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 RANBP9Q96S59 729 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 GSTO2Q9H4Y5 243 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 PLGRKTQ9HBL7 147 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 PKD2L2Q9NZM6 624 aa16.7■□□□□ 0.26
SIPA1-201ENST00000394224 SUCOQ9UBS9 1254 aaKnown RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 PAIP2BQ9ULR5 123 aaKnown RBP16.7■□□□□ 0.26
SIPA1-201ENST00000394224 TRIM43BA6NCK2 446 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 ASB14A6NK59 587 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 MMP3P08254 477 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 AGXTP21549 392 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 MAGEA12P43365 314 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 NUP107P57740 925 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 UGT3A2Q3SY77 523 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 NANOGP8Q6NSW7 305 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 LYSMD3Q7Z3D4 306 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 ZNF513Q8N8E2 541 aaPredicted RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 SEMA3CQ99985 751 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 APOL5Q9BWW9 433 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 AGO3Q9H9G7 860 aaKnown RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 LINC00854A0A1B0GVQ3 168 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 AZIN1O14977 448 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 XPNPEP2O43895 674 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 SLC6A2P23975 617 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 RPS12P25398 132 aaKnown RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 RPS9P46781 194 aaKnown RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 PRKAA2P54646 552 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 OCA2Q04671 838 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 TNK2Q07912 1038 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 TGFBIQ15582 683 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 ERMP1Q7Z2K6 904 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 ISCA2Q86U28 154 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 LRRTM3Q86VH5 581 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 CENPSQ8N2Z9 138 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 C17orf80Q9BSJ5 609 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 SUN2Q9UH99 717 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 DAPK2Q9UIK4 370 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 ASB1Q9Y576 335 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 POLR2AP24928 1970 aaKnown RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 GSTA4O15217 222 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 MAFKO60675 156 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 SNAI1O95863 264 aaPredicted RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 TGFBR1P36897 503 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 SH3BGRP55822 239 aaPredicted RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 RAB44Q7Z6P3 723 aaPredicted RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 ANKRD46Q86W74 232 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms