RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 STRADBQ9C0K7 418 aa17.69■□□□□ 0.42
HDDC3-201ENST00000330334 ABCG8Q9H221 673 aa17.69■□□□□ 0.42
HDDC3-201ENST00000330334 PCDH9Q9HC56 1237 aa17.69■□□□□ 0.42
HDDC3-201ENST00000330334 LRIT1Q9P2V4 623 aa17.69■□□□□ 0.42
HDDC3-201ENST00000330334 MOSPD1Q9UJG1 213 aa17.69■□□□□ 0.42
HDDC3-201ENST00000330334 SUFUQ9UMX1 484 aa17.69■□□□□ 0.42
HDDC3-201ENST00000330334 CHKBQ9Y259 395 aa17.69■□□□□ 0.42
HDDC3-201ENST00000330334 FASNP49327 2511 aaKnown RBP17.68■□□□□ 0.42
HDDC3-201ENST00000330334 LRRD1A4D1F6 860 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 RGSL1A5PLK6 1076 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 CASC3O15234 703 aaKnown RBP17.68■□□□□ 0.42
HDDC3-201ENST00000330334 JCHAINP01591 159 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 FGF1P05230 155 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 HLA-DQB2P05538 268 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 ITGA2BP08514 1039 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 ZFP36L1Q07352 338 aaKnown RBP17.68■□□□□ 0.42
HDDC3-201ENST00000330334 TBX2Q13207 712 aaPredicted RBP17.68■□□□□ 0.42
HDDC3-201ENST00000330334 CLPPQ16740 277 aaPredicted RBP17.68■□□□□ 0.42
HDDC3-201ENST00000330334 ZNF438Q7Z4V0 828 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 LSM14AQ8ND56 463 aaKnown RBP17.68■□□□□ 0.42
HDDC3-201ENST00000330334 TMEM159Q96B96 161 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 MAK16Q9BXY0 300 aaKnown RBP17.68■□□□□ 0.42
HDDC3-201ENST00000330334 BRD8Q9H0E9 1235 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 SPATS2LQ9NUQ6 558 aaKnown RBP17.68■□□□□ 0.42
HDDC3-201ENST00000330334 SPTLC3Q9NUV7 552 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 RNF215Q9Y6U7 377 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 MGAQ8IWI9 3026 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 SHROOM3Q8TF72 1996 aa17.68■□□□□ 0.42
HDDC3-201ENST00000330334 TEX51A0A1B0GUA7 166 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 ANKRD66B4E2M5 251 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 TK2O00142 265 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 PLD2O14939 933 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 ZW10O43264 779 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 MMP2P08253 660 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 GNPDA1P46926 289 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 INHBCP55103 352 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 NR1D2Q14995 579 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 PDK1Q15118 436 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 BROXQ5VW32 411 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 RFLNAQ6ZTI6 216 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 GPR155Q7Z3F1 870 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 SPRED1Q7Z699 444 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 CNTD1Q8N815 330 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 EXD1Q8NHP7 514 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 KCNE4Q8WWG9 221 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 SCAMP4Q969E2 229 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 COX14Q96I36 57 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 FCRL3Q96P31 734 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-201ENST00000330334 OLFM3Q96PB7 478 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 ANP32EQ9BTT0 268 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 ADGRE3Q9BY15 652 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 DDX56Q9NY93 547 aaKnown RBP17.67■□□□□ 0.42
HDDC3-201ENST00000330334 TAAR2Q9P1P5 351 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 TTLL3Q9Y4R7 772 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 PCDHGA7Q9Y5G6 932 aa17.67■□□□□ 0.42
HDDC3-201ENST00000330334 A0A0U1RQS6 177 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 GOLGA6CA6NDK9 693 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 GOLGA6BA6NDN3 693 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 B4DGG1 531 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 AKR1B15C9JRZ8 316 aaPredicted RBP17.66■□□□□ 0.42
HDDC3-201ENST00000330334 KCNK1O00180 336 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 APOL1O14791 398 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 TNFSF15O95150 251 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 GOLGA6DP0CG33 693 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 ADCY8P40145 1251 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 GPR3P46089 330 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 POLD2P49005 469 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 B4GALNT1Q00973 533 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 CTBSQ01459 385 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 SLC14A2Q15849 920 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 SARM1Q6SZW1 724 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 RAB11FIP2Q7L804 512 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 B3GNT8Q7Z7M8 397 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 RHOT1Q8IXI2 618 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 FBXO39Q8N4B4 442 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.66■□□□□ 0.42
HDDC3-201ENST00000330334 ZDHHC1Q8WTX9 485 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 SNRNP27Q8WVK2 155 aaKnown RBP17.66■□□□□ 0.42
HDDC3-201ENST00000330334 BBC3Q96PG8 261 aaPredicted RBP17.66■□□□□ 0.42
HDDC3-201ENST00000330334 SMIM14Q96QK8 99 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 MLPHQ9BV36 600 aaPredicted RBP17.66■□□□□ 0.42
HDDC3-201ENST00000330334 CDH19Q9H159 772 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 SYNDIG1Q9H7V2 258 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 GOLGA6AQ9NYA3 693 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 CD84Q9UIB8 345 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 HEY1Q9Y5J3 304 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 ST14Q9Y5Y6 855 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 KALRNO60229 2985 aa17.66■□□□□ 0.42
HDDC3-201ENST00000330334 CLDN7O95471 211 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 CD86P42081 329 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 NR2C2P49116 596 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 SPINT3P49223 89 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 HADHBP55084 474 aaKnown RBP17.65■□□□□ 0.42
HDDC3-201ENST00000330334 TMPRSS3P57727 454 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 SQSTM1Q13501 440 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 LRP8Q14114 963 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 TAZQ16635 292 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 QPCTQ16769 361 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 PYCR3Q53H96 274 aa17.65■□□□□ 0.42
HDDC3-201ENST00000330334 BZW1Q7L1Q6 419 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms