RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 HARS2P49590 506 aaKnown RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 TMED10P49755 219 aaKnown RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 ENTPD1P49961 510 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 BCAP31P51572 246 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 CCR3P51677 355 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 ELAVL2Q12926 359 aaKnown RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 TUBB3Q13509 450 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 ZNF235Q14590 738 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 SIRPB2Q5JXA9 342 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 TSTD2Q5T7W7 516 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 IL31Q6EBC2 164 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 THOC7Q6I9Y2 204 aaKnown RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 ZFP1Q6P2D0 407 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 IYDQ6PHW0 289 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 TICAM1Q8IUC6 712 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 CENPLQ8N0S6 344 aaPredicted RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 CCNYL1Q8N7R7 359 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 TDRD5Q8NAT2 981 aaKnown RBP11.58□□□□□ -0.56
USP35-207ENST00000530546 SHKBP1Q8TBC3 707 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 BLOC1S5Q8TDH9 187 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 CMTM5Q96DZ9 223 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 LRGUKQ96M69 825 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 PPP1R2P1Q96PQ5 205 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 HIPK3Q9H422 1215 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 GKN1Q9NS71 199 aa11.58□□□□□ -0.56
USP35-207ENST00000530546 TBC1D4O60343 1298 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 TSPAN3O60637 253 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 KLHL41O60662 606 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 BAIAP3O94812 1187 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 ARSDP51689 593 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 RPS24P62847 133 aaKnown RBP11.57□□□□□ -0.56
USP35-207ENST00000530546 SERINC3Q13530 473 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 CSHL1Q14406 222 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 GALNT3Q14435 633 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 KIAA0930Q6ICG6 404 aaPredicted RBP11.57□□□□□ -0.56
USP35-207ENST00000530546 LRRC8EQ6NSJ5 796 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 DENND1CQ8IV53 801 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 TSPAN14Q8NG11 270 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 HDAC10Q969S8 669 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 CCDC124Q96CT7 223 aaKnown RBP11.57□□□□□ -0.56
USP35-207ENST00000530546 EXOC2Q96KP1 924 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 SPATA17Q96L03 361 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 CGREF1Q99674 301 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 MRPL9Q9BYD2 267 aaKnown RBP11.57□□□□□ -0.56
USP35-207ENST00000530546 SLC2A11Q9BYW1 496 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 COG4Q9H9E3 785 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 CROTQ9UKG9 612 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 ANKRD6Q9Y2G4 727 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 DRGXA6NNA5 263 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 SLC4A1P02730 911 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 SBK3P0C264 359 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 MYL4P12829 197 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 HMOX2P30519 316 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 ATP5C1P36542 298 aaKnown RBP11.57□□□□□ -0.56
USP35-207ENST00000530546 HADHAP40939 763 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 STT3AP46977 705 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 SLC9B1Q4ZJI4 515 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 ELMSAN1Q6PJG2 1045 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 CNTN4Q8IWV2 1026 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 TRIML2Q8N7C3 387 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 C2CD4AQ8NCU7 369 aaPredicted RBP11.57□□□□□ -0.56
USP35-207ENST00000530546 OR52K2Q8NGK3 314 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 ARRDC2Q8TBH0 407 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 MAPK15Q8TD08 544 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 PRKD2Q9BZL6 878 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 FAM96AQ9H5X1 160 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 VPS45Q9NRW7 570 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 OXSMQ9NWU1 459 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 FNIP2Q9P278 1114 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 PCDHGB4Q9UN71 923 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 PCDHGB5Q9Y5G0 923 aa11.57□□□□□ -0.56
USP35-207ENST00000530546 ZFP37Q9Y6Q3 630 aaPredicted RBP11.57□□□□□ -0.56
USP35-207ENST00000530546 BPTFQ12830 3046 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 LOC100653049A0A140TA62 436 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 NEMP2A6NFY4 417 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 SOBPA7XYQ1 873 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 HOXA2O43364 376 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 SIN3BO75182 1162 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 KRT34O76011 436 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 PIGNO95427 931 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 IGLV3-27P01718 113 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 OCM2P0CE71 109 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 OCMP0CE72 109 aaPredicted RBP11.56□□□□□ -0.56
USP35-207ENST00000530546 GLDCP23378 1020 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 VEGFBP49765 207 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 TUBA4AP68366 448 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 PRAMEP78395 509 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 IL10RBQ08334 325 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 PEX6Q13608 980 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 ADGRE1Q14246 886 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 TAF12Q16514 161 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 EML3Q32P44 896 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 ZNF829Q3KNS6 432 aaPredicted RBP11.56□□□□□ -0.56
USP35-207ENST00000530546 ZYG11AQ6WRX3 759 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 REM2Q8IYK8 340 aaPredicted RBP11.56□□□□□ -0.56
USP35-207ENST00000530546 PTCD2Q8WV60 388 aaKnown RBP11.56□□□□□ -0.56
USP35-207ENST00000530546 CDH19Q9H159 772 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 BCAP29Q9UHQ4 241 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 DNMT3LQ9UJW3 386 aa11.56□□□□□ -0.56
USP35-207ENST00000530546 CNOT11Q9UKZ1 510 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms