RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 IGSF6O95976 241 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 KPNA2P52292 529 aaKnown RBP16.83■□□□□ 0.28
SREK1-212ENST00000522912 PRKAA2P54646 552 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 NAGLUP54802 743 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 KCNJ2P63252 427 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 ILF2Q12905 390 aaKnown RBP16.83■□□□□ 0.28
SREK1-212ENST00000522912 PSAPL1Q6NUJ1 521 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 METTL3Q86U44 580 aaKnown RBP16.83■□□□□ 0.28
SREK1-212ENST00000522912 SIKE1Q9BRV8 207 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 DRC3Q9H069 523 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 ARL8BQ9NVJ2 186 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 IL17CQ9P0M4 197 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 HS3ST2Q9Y278 367 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 WNT6Q9Y6F9 365 aa16.83■□□□□ 0.28
SREK1-212ENST00000522912 PRRC2BQ5JSZ5 2229 aaKnown RBP16.83■□□□□ 0.28
SREK1-212ENST00000522912 UBA6A0AVT1 1052 aaPredicted RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 CFAP73A6NFT4 308 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 NEMP2A6NFY4 417 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 H7C0S8 307 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 RASSF9O75901 435 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 CHRNGP07510 517 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 TYRP14679 529 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 ALOX15P16050 662 aaPredicted RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 SUOXP51687 545 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 PFKPQ01813 784 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 TUBB3Q13509 450 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 LY6G5CQ5SRR4 150 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 OR2AP1Q8NGE2 309 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 ITFG1Q8TB96 612 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 TMEM237Q96Q45 408 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 TCF12Q99081 682 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 GPR63Q9BZJ6 419 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 ARHGEF3Q9NR81 526 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 FNDC3AQ9Y2H6 1198 aaKnown RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 CXorf51AA0A1B0GTR3 108 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 NQO1P15559 274 aaKnown RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 HOXB8P17481 243 aaPredicted RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 KCNA5P22460 613 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 FMO4P31512 558 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 MAPK8P45983 427 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 RPL26P61254 145 aaKnown RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 ERVK-21P61565 698 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 XIAPP98170 497 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 ACAP2Q15057 778 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 PDE12Q6L8Q7 609 aaKnown RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 ZSWIM9Q86XI8 627 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 ADGRG2Q8IZP9 1017 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 RYBPQ8N488 228 aaPredicted RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 C12orf76Q8N812 135 aaPredicted RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 SLC7A6OSQ96CW6 309 aaPredicted RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 LRRC3BQ96PB8 259 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 CDH19Q9H159 772 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 ATP13A3Q9H7F0 1226 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 CERS4Q9HA82 394 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 TBC1D14Q9P2M4 693 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 RPL26L1Q9UNX3 145 aaKnown RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 YBX2Q9Y2T7 364 aaKnown RBP16.82■□□□□ 0.28
SREK1-212ENST00000522912 MED16Q9Y2X0 877 aa16.82■□□□□ 0.28
SREK1-212ENST00000522912 A0A0J9YYE9 177 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 ZNF197O14709 1029 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 SOCS5O75159 536 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 NDUFS3O75489 264 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 TRBC1P01850 177 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 POU2F2P09086 479 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 PABPC1P11940 636 aaKnown RBP16.81■□□□□ 0.28
SREK1-212ENST00000522912 TCF3P15923 654 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 HMGCLP35914 325 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 SLC26A3P40879 764 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 KCNC1P48547 511 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 IDH3AP50213 366 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 RCN2Q14257 317 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 SETMARQ53H47 684 aaPredicted RBP16.81■□□□□ 0.28
SREK1-212ENST00000522912 ZRANB3Q5FWF4 1079 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 C22orf39Q6P5X5 142 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 LSMEM2Q8N112 164 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.81■□□□□ 0.28
SREK1-212ENST00000522912 ISG20Q96AZ6 181 aaKnown RBP16.81■□□□□ 0.28
SREK1-212ENST00000522912 FAM136AQ96C01 138 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 RILPQ96NA2 401 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 ARMCX1Q9P291 453 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 MRPS23Q9Y3D9 190 aaKnown RBP16.81■□□□□ 0.28
SREK1-212ENST00000522912 PKP3Q9Y446 797 aa16.81■□□□□ 0.28
SREK1-212ENST00000522912 NUP210Q8TEM1 1887 aaPredicted RBP16.81■□□□□ 0.28
SREK1-212ENST00000522912 TRIM24O15164 1050 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 RBP1P09455 135 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 TFEBP19484 476 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 ATP5F1P24539 256 aaPredicted RBP16.8■□□□□ 0.28
SREK1-212ENST00000522912 MPSTP25325 297 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 SNRPD1P62314 119 aaKnown RBP16.8■□□□□ 0.28
SREK1-212ENST00000522912 SHHQ15465 462 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 CDKN3Q16667 212 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 MYLK3Q32MK0 819 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 ARL13AQ5H913 290 aaPredicted RBP16.8■□□□□ 0.28
SREK1-212ENST00000522912 VWA5B1Q5TIE3 1220 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 FAM91A1Q658Y4 838 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 KLC3Q6P597 504 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 ISCA2Q86U28 154 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 PTCD3Q96EY7 689 aaKnown RBP16.8■□□□□ 0.28
SREK1-212ENST00000522912 BIRC8Q96P09 236 aa16.8■□□□□ 0.28
SREK1-212ENST00000522912 LRMDAQ9H2I8 198 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms